ID   AM087203; SV 1; linear; genomic RNA; STD; VRL; 1567 BP.
XX
AC   AM087203;
XX
DT   29-JUN-2006 (Rel. 88, Created)
DT   29-JUN-2006 (Rel. 88, Last updated, Version 1)
XX
DE   Ophiostoma partitivirus 1 CP gene for capsid protein
XX
KW   capsid protein; CP gene.
XX
OS   Ophiostoma partitivirus 1
OC   Viruses; Riboviria; Partitiviridae; Gammapartitivirus.
XX
RN   [1]
RP   1-1567
RA   Buck K.W.;
RT   ;
RL   Submitted (21-SEP-2005) to the INSDC.
RL   Buck K.W., Biology, Imperial College London, Sir Alexander Fleming
RL   Building, London, SW7 2AZ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s11262-005-0028-6.
RX   PUBMED; 16791416.
RA   Crawford L.J., Osman T.A.M., Booy F.P., Coutts R.H.A., Brasier C.M.,
RA   Buck K.W.;
RT   "Molecular characterization of a partitivirus from Ophiostoma himal-ulmi";
RL   Virus Genes 33(1):33-39(2006).
XX
DR   MD5; 733a54cff80b798f946732250761eb7c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1567
FT                   /organism="Ophiostoma partitivirus 1"
FT                   /segment="S2"
FT                   /host="Ophiostoma himal-ulmi"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /db_xref="taxon:347482"
FT   CDS             109..1401
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q18L81"
FT                   /protein_id="CAJ31887.1"
FT                   /translation="MSSVVPSDSASSAGRKKKPGKAERAARRSAVSSAPGAPASNQKAA
FT                   AFAAATSSFDVRPQPGKFPVVFATGAGEPSRDMKFSVRPRVVASGLSSFLPAFKDNPRY
FT                   SEFLTFTEYTDADFSRQLSVAALLRLAQQIVAAHVNMGLPQGDFSPLSSTEVRLPASVS
FT                   AFLSQFGEMSVPSIGTRLLLANYTSTVHSLVLAADRLTQGGSVQQTAERLWLPMSSRDT
FT                   RTRAIVAGQIWDLSNQAGLSIPRSDLEDAVLSGNHPDFWDTVVEQLEADPARRPEWNFL
FT                   FQTQADVGQFATNWTTANATRVLGKLGLEWPNPSAGHLDWQFSAKTVFSELADQWAQKS
FT                   AAYAQFFEMTSSAASKPTAAGSLSQFAAVSTNDSVTVIKTFLALSAPEFSLAACFPSTG
FT                   FIHADVPHNVVVTTPLSVRQKTTEFIQMDWR"
XX
SQ   Sequence 1567 BP; 286 A; 511 C; 367 G; 403 T; 0 other;
     atcgaaacaa ttcgttgtac cttctgttta ccaggaggtt tttatatttt ccttcgtttt        60
     acttttcctc cttcacttct gacgcctaca ccacctcttg ccgtcaagat gtcttccgtg       120
     gtaccttccg actccgcttc gtccgctgga cgcaagaaga agcctggcaa ggctgagcgt       180
     gccgcccgtc gttccgccgt ttcctcggcc cccggcgcac ctgcctccaa ccagaaggca       240
     gctgctttcg cagctgccac ttcttctttc gacgtcaggc cccagcctgg taaatttcct       300
     gtagttttcg ctacgggtgc aggcgagccg tctcgcgata tgaagttctc cgtccgtccc       360
     cgtgtcgtag cctcgggttt gtcctctttc ctccccgctt tcaaggacaa cccgcgctac       420
     tccgaattcc ttaccttcac ggagtatacg gacgctgact tcagtcgcca gctcagcgtc       480
     gcggctctgt tgcgtctagc gcagcagatt gtggccgctc atgttaacat gggcctgccg       540
     caaggtgatt tctcaccatt gtcgtcaacg gaggtccgtc taccggcctc cgtgtctgca       600
     ttcctctccc agtttggaga gatgtctgtc ccgtctatcg ggactcgtct cctcctggcg       660
     aattacacgt ctaccgtgca ttcgcttgtc ctggccgctg accgccttac ccaaggcggg       720
     tcagtccaac aaaccgctga gcggttgtgg cttcccatgt cctcccggga tacccgcacc       780
     cgcgccatcg ttgccggaca aatctgggac ctgtctaacc aggctggatt gtcgattccc       840
     cgttcggatc ttgaagacgc cgttctatct gggaatcacc ccgacttttg ggacacagtt       900
     gtcgaacaac tggaggccga cccggcccgc cgtcccgaat ggaacttcct gttccaaacc       960
     caggccgatg taggccagtt cgccacgaac tggaccaccg ccaacgctac acgcgtcctg      1020
     ggtaaactgg gcctcgaatg gcccaacccg tccgccggac atctggattg gcagttttct      1080
     gccaaaaccg tgttctccga gctcgctgac caatgggctc aaaaatctgc tgcttatgca      1140
     cagttttttg agatgacgtc ttccgccgcc agcaagccca ctgccgcagg ttctctgtcg      1200
     cagtttgctg ccgtctccac caatgacagt gtcactgtca ttaagacctt cctcgccctg      1260
     tccgctccgg agttttctct ggctgcatgt ttcccgtcta ccgggtttat acatgccgac      1320
     gttccccaca acgtcgttgt gacaacacct ctctcagtgc ggcagaaaac cactgaattc      1380
     atccagatgg actggcgcta gccaccatct ctgcctacaa taactgagtc gtgtaccccc      1440
     ttccggttct tcggaaaaac aatctgcctc tgcagtgtgt gtctcctgtc ttaccaggga      1500
     cctaaaaatt actattaagt gaaagagtgg gaatgacctg tctatcaggt ctaccgtaaa      1560
     tctccag                                                                1567
//