ID AM085137; SV 2; linear; genomic RNA; STD; VRL; 5047 BP. XX AC AM085137; XX DT 23-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 2) XX DE Amasya cherry disease-associated mycovirus ORF for hypothetical protein, DE genomic RNA XX KW ORF. XX OS Amasya cherry disease-associated mycovirus OC Viruses; Riboviria; Partitiviridae; Alphapartitivirus. XX RN [1] RC revised by author [11-JAN-2006] RP 1-5047 RA Coutts R.H.A.; RT ; RL Submitted (08-SEP-2005) to the INSDC. RL Coutts R.H.A., Biology, Faculty of Life Sciences, Imperial College London, RL Sir Alexander Fleming Building, Imperial College Road, SW7 2AZ, UNITED RL KINGDOM. XX RN [2] RX DOI; 10.1099/vir.0.82121-0. RX PUBMED; 16963771. RA Kozlakidis Z., Covelli L., Di Serio F., Citir A., Acikgoz S., Hernandez C., RA Ragozzino A., Flores R., Coutts R.H.A.; RT "Molecular characterization of the largest mycoviral-like double-stranded RT RNAs associated with Amasya cherry disease, a disease of presumed fungal RT aetiology"; RL J. Gen. Virol. 87(Pt 10):3113-3117(2006). XX DR MD5; 667cba664a6cad0cbd42e2fa5fa5f776. XX FH Key Location/Qualifiers FH FT source 1..5047 FT /organism="Amasya cherry disease-associated mycovirus" FT /mol_type="genomic RNA" FT /country="Turkey:Amasya" FT /isolation_source="unidentified fungus" FT /note="unclassified putative mycovirus (putative member of FT the family Totiviridae)" FT /db_xref="taxon:284689" FT CDS 36..4898 FT /product="hypothetical protein" FT /note="ORF" FT /db_xref="UniProtKB/TrEMBL:Q1HA35" FT /protein_id="CAJ29961.2" FT /translation="MSQISKIFRENEEAETTGYSKGLRGIEDVLQSCIANEAPNPADRA FT NYLNCVKQIISDRVLARDNFLKGLQHYCVPQATSVNPVVGAPAQGFGMAAAGQYFISAS FT NLIPVDEQLEAYDGILTAGAMSSERMAVGKVPLKAPMRAGSVTVNTFVITPRSGDVRAI FT TTRTSFRETQNMSRNVLTVLTAASFEGEFFNTELDGVMSFRKRRPLISTSHVVETGKGV FT ASRRDYDVSMSESTQIINIRQSLKGKKIKFAPGAELIHCAMVLAYHAVTDVWKSVFGSS FT VPEQYDQKTPNAEYVIRSAIASLNFKPSEHYLLVAEAAASLACVYGMADESMVESISPA FT ITVLEPAGNLVTSGMPNGVRATQVIQWQTQGVLTLELAMTRLFSVFTSQADKHKYERME FT HYAQLRKQGANIFNIDSANNFVTAKIAALMATNRFLGFGGKHKHYEELIVTPTGHGFYE FT IVDKEEPFMRSGVLSSRSALTSDSVLGSAIRTRYTTDIVSEGSYACSVTSQHDEYVQGP FT QNEQGVLLTNVAAPRATAGALNSLMAWVDNACVADGNDRSDVNIISGQIIGAESRIMAI FT APELRRYGFELRVDDEKVLGIGNPRKDYAFTTTSHSRIAVPITSSGRPIGTQASKSLFL FT ASLSSAIADETGVASVVNLYRALMCIRTKRGVCVSPMKWHDKKMDLKQLIVGSATYRSA FT FNDAECANKVVITSSSINRPVFEFGGFDKRSLLYGVAAARHSDATGTFYVKPEMARAGT FT RAASAVYTALQSGQYIDQADLSSWLDAAAALAEEGELEFTWHSQRAFNFAKEVYCHSLT FT KHPKRSLARLVWHACTGYALTLTKRGLKYKNDKLNSAEMTPAARLDQVHALFANSTPKV FT RYIASLMVGVDANWPNYLSLVHTYQVCVSETGKKSQGNIKSVHEVMSTPKTCVKNRKCP FT RMPSPCQTSCCGYIRQQHVCRKCKQAISCALCVQAITESGVLVDGALEINKVKKTPSIE FT DVKDVKMLGTEHIADIEYADEVLAEKQRRPSDRSEDIREQMMLNANALVLKFSGRKGAH FT SKKLSVDVETEQEECVDFDGGLTPSPVKTQGGESDSSAEVTSIREDIRINNAELVLEPP FT RPEVSDEVADKLTQAKEFADSLTTTSSETRDKKSWDVPYMNAAEEKVYRTERVREQLGR FT IRRDLMEEQSSDDESFKKGNSVARPPTPTTCQDLGGKWSGMPLLTCGKEGKCPMFDHEI FT GVNTEVQVMAGMSKGMPLDKDEMHPSSMDVSMSWKINWFGNSMLNSQLKLNCGNKHNVT FT GPHFCLFKKQGEEHSILALAKKADMFNKIAPAQIIRTIEPKIPQPPPTFAPGQATFRDV FT TRYCVCLGCTSFKQTKDKRSISGSFIDFPIWHWELSEVRELDIRLPHSFRNCRLGELHQ FT HLGELSTFNAVVPWLSNMLGFLVTPVNLEMSLEYGEFHIRNPIIAGVKGRMMKNEYPYQ FT ARLYFKNAQVTHVNLVHMSLPCCHLGYGNLHRIPVNQKNSFPHAARVVIDKSIVLTPHD FT DEIKLYKFIAAANLLWPDAGQTTPVYTTIIMTGAVVGDMRHYRMFRPKVNGQMGDTARI FT MAFEEPTRIEEVELGTKMKTGEGTIAMMRQFWSEDTLQYIN" XX SQ Sequence 5047 BP; 1515 A; 1100 C; 1427 G; 1005 T; 0 other; tacgaaaaaa cacaaaacta ctctgcaaac tcaacatgtc gcaaattagc aagattttca 60 gagagaacga ggaggcagag actacaggtt actcaaaagg cctgagaggc attgaggatg 120 tactacagag ctgcatagca aacgaagcgc ctaacccggc ggatagggcg aactacctga 180 actgtgtaaa gcagatcatc agcgacaggg tgctagccag agacaacttt ctgaaaggat 240 tgcaacacta ttgcgtaccg caggccacga gcgtcaaccc ggtggtcgga gcgccggccc 300 aaggtttcgg tatggcagca gcaggccagt atttcatatc ggccagcaac ctgatcccag 360 tagatgagca gcttgaggcg tatgatggca tattaacagc cggagcgatg tcgtcagaga 420 ggatggctgt gggcaaagta ccacttaaag cgccaatgag agctggatct gtgacggtga 480 acacgtttgt gatcacgcca aggtctggtg acgtaagggc catcacgacc agaacgtcgt 540 tccgtgagac acaaaacatg agcagaaacg tgctcacagt gctcactgca gcaagttttg 600 aaggagaatt tttcaacaca gaactagacg gtgtgatgtc tttcaggaag cgcaggccac 660 tgatctcaac gtctcacgtt gttgagacag gtaaaggtgt ggcttcgagg agagactacg 720 acgtttcgat gtctgaatcg acccaaataa taaacataag gcaaagcttg aaaggcaaga 780 aaatcaagtt cgccccggga gctgaattga tacattgtgc gatggtgctc gcttaccacg 840 cggtgacgga cgtgtggaaa tcggtctttg ggtcaagtgt accagagcag tacgaccaga 900 aaactccgaa cgcggagtat gtcattagat cggcaattgc aagcttgaat ttcaagccca 960 gtgaacacta cttgcttgtt gcggaagctg cggcttcact agcttgtgtg tatggcatgg 1020 ctgacgaatc gatggttgaa tccatatcgc cagcaatcac agtgctagag ccagcaggta 1080 atctagtaac ttcgggcatg ccgaacggag ttagggcaac acaagtgata cagtggcaga 1140 cacaaggagt tctaactctg gagctcgcaa tgactagact cttcagtgtg tttacgtcgc 1200 aagcggacaa acacaagtat gaaaggatgg aacactacgc gcaactgagg aagcagggag 1260 cgaacatatt taacatagac agcgccaaca actttgtcac cgcgaagatc gcggcactga 1320 tggcgaccaa taggttcttg ggttttggag gcaagcacaa gcattacgag gagttgatcg 1380 tgacaccgac tggacatggg ttctacgaaa tcgtggacaa ggaggagccg ttcatgaggt 1440 ccggtgtgtt gagttcgaga agcgcactga cctcggacag cgttctagga agcgcaatta 1500 ggacgcgcta tactacagac attgtgtctg aaggtagcta tgcctgctcc gtgacatctc 1560 agcacgatga atacgtgcaa gggccgcaaa acgagcaggg tgtgttgttg actaacgtag 1620 cagctccgag ggcaacggct ggagcactga actccctgat ggcgtgggta gacaacgctt 1680 gcgttgctga cgggaatgat agatcagacg tcaacataat aagtggccag attataggtg 1740 cggaatcaag aataatggcc atcgcaccgg agctgaggag gtacggtttc gagctcaggg 1800 ttgatgatga aaaagtgttg gggattggca acccaaggaa agattatgcc ttcacgacga 1860 cgagccacag cagaattgcg gtgccaataa cttcgagcgg tcgcccgatc ggaacacagg 1920 cctcaaaatc actgttcctg gcgtccctgt cgtcagcgat tgcagatgag actggagtag 1980 cctcagtcgt aaacttgtac agggcactga tgtgcataag gacaaaacga ggtgtttgtg 2040 tgtcaccaat gaagtggcat gataagaaga tggatctgaa acaactgatt gtgggttctg 2100 caacatatcg ttctgcgttc aacgatgcag agtgcgcaaa caaagtggtt atcacgagct 2160 ctagcatcaa cagacctgtg tttgagtttg gtggcttcga taagcggtca ttgctatacg 2220 gtgtcgcagc ggcgaggcac tctgacgcga cgggcacgtt ctatgtgaag ccagagatgg 2280 cacgtgcagg aacaagagcg gcctcggcag tgtacactgc gttgcaaagt gggcaataca 2340 tagaccaggc agacttgtca tcatggctag acgcagcagc tgctctggca gaagaaggag 2400 agttggaatt cacctggcac agccaaagag cattcaattt tgccaaggaa gtgtattgcc 2460 attcactcac gaaacaccca aagaggtcat tggcaaggct ggtttggcac gcttgtactg 2520 gctacgcact gacgttgact aaacgagggc tcaagtataa aaacgacaag ttgaacagcg 2580 cagagatgac acctgcagca agattagacc aggtgcatgc gctgttcgcc aacagcacgc 2640 cgaaggtgag gtacatcgct tcgctgatgg tgggagtaga tgcgaactgg ccaaactacc 2700 taagtctagt gcatacgtac caagtgtgtg tatcagaaac ggggaagaaa agccaaggca 2760 atatcaaatc agtgcacgaa gtgatgagca cgccgaagac gtgtgtgaag aaccggaagt 2820 gccctaggat gccatcgcca tgccaaacga gctgctgtgg gtacatacgg caacagcatg 2880 tttgcaggaa atgcaagcaa gctatatcgt gtgcactttg tgtacaggcg atcactgagt 2940 ctggggtgct agtggatggt gcactagaga tcaacaaagt gaagaagacg ccgtccattg 3000 aggacgtgaa agatgtcaaa atgctgggca cagagcacat tgcagacatt gagtacgcag 3060 atgaagtgct ggcagagaag caaaggaggc caagtgacag gtcagaggac ataagagagc 3120 agatgatgct gaacgcaaat gcactggtgc tgaagttttc gggtagaaaa ggcgctcact 3180 ctaagaagct gagcgttgac gtggaaacag agcaggaaga gtgtgttgac ttcgacggcg 3240 ggcttacccc tagccctgtt aagacgcagg gcggggaatc agactccagt gcagaagtaa 3300 cttcaatcag agaggacatc aggatcaaca acgcggaact agtgctagaa ccaccacgac 3360 cagaagtaag tgacgaagtg gcagacaagc taactcaagc aaaagagttc gcagactcgc 3420 tgaccacaac cagttcagag acgagagaca aaaaatcatg ggatgtgcct tacatgaacg 3480 ctgccgaaga gaaggtgtac agaactgagc gcgtgagaga gcagcttggc aggataagac 3540 gtgacttaat ggaagagcag agcagcgatg atgaatcttt caagaaaggc aactcagtgg 3600 ccaggccacc aacaccaacg acgtgccaag accttggtgg taagtggagc ggcatgccac 3660 tcctgacatg tggaaaagaa gggaagtgcc ctatgtttga ccacgaaatt ggggttaaca 3720 ccgaggtgca ggtgatggct gggatgagca aaggaatgcc tttggacaaa gatgaaatgc 3780 acccaagcag tatggatgta tctatgagct ggaagataaa ctggttcggg aactcaatgt 3840 taaatagtca actgaaactg aactgtggaa acaagcacaa tgtgacagga ccacactttt 3900 gcctgttcaa aaagcagggg gaggagcact ctatacttgc gttagctaaa aaagctgaca 3960 tgttcaacaa gatagcacca gcgcaaataa taaggacaat agagccaaag ataccgcaac 4020 cgcctccaac attcgcgcca ggacaagcaa ctttcaggga cgtcaccagg tactgcgtgt 4080 gcctagggtg tacttcgttc aagcagacga aggacaaacg atcaatatcc ggaagcttca 4140 tcgactttcc gatttggcac tgggagctgt cggaagtgag agaactagat ataagactac 4200 cacattcatt caggaattgt aggttggggg agctacacca acacttgggt gagctgtcca 4260 cgttcaacgc agttgtgcca tggctgtcaa acatgctggg gttcctagtt actccagtga 4320 acttggaaat gtcgcttgag tatggagagt tccacataag gaacccgata atagcaggtg 4380 tcaaggggag aatgatgaaa aacgagtacc cataccaggc tagattgtac ttcaaaaacg 4440 cgcaagtgac gcacgtgaac cttgtgcata tgtcgttgcc atgctgccac ttggggtacg 4500 gcaatttgca caggatacca gtgaaccaga aaaacagctt cccgcacgcg gctagggtgg 4560 tgattgataa gagcatagtg ctgacgcctc acgatgacga aatcaagctg tacaagttca 4620 tagcagcggc aaacctgctg tggccagacg cagggcagac gactccagtg tacactacaa 4680 tcataatgac aggtgcagta gtgggcgaca tgcgtcacta cagaatgttc cggccgaaag 4740 tcaacgggca aatgggagac acggctagaa taatggcttt tgaagaacca actcggatag 4800 aggaagtaga gctggggaca aagatgaaga ctggcgaagg aacaatagct atgatgagac 4860 agttctggag cgaagacacc ttgcagtata taaactgata ggatataaaa gtgcgtccgt 4920 gcacgtgatg gggcaatcac gtgcacgtta aagaaaaacg gtctagtcaa ccacttcaaa 4980 ctaagacagg cttaaattgg ccactcgtgg cgcccaggcg agtaaacgta acactataaa 5040 atagacg 5047 //