ID AM085136; SV 1; linear; genomic RNA; STD; VRL; 5121 BP. XX AC AM085136; XX DT 23-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 2) XX DE Amasya cherry disease-associated mycovirus ORF for hypothetical protein, DE genomic RNA XX KW ORF. XX OS Amasya cherry disease-associated mycovirus OC Viruses; Riboviria; Partitiviridae; Alphapartitivirus. XX RN [1] RP 1-5121 RA Coutts R.H.A.; RT ; RL Submitted (08-SEP-2005) to the INSDC. RL Coutts R.H.A., Biology, Faculty of Life Sciences, Imperial College London, RL Sir Alexander Fleming Building, Imperial College Road, SW7 2AZ, UNITED RL KINGDOM. XX RN [2] RX DOI; 10.1099/vir.0.82121-0. RX PUBMED; 16963771. RA Kozlakidis Z., Covelli L., Di Serio F., Citir A., Acikgoz S., Hernandez C., RA Ragozzino A., Flores R., Coutts R.H.A.; RT "Molecular characterization of the largest mycoviral-like double-stranded RT RNAs associated with Amasya cherry disease, a disease of presumed fungal RT aetiology"; RL J. Gen. Virol. 87(Pt 10):3113-3117(2006). XX DR MD5; 654279429f8bcc2e274ea4dad8c93b60. XX FH Key Location/Qualifiers FH FT source 1..5121 FT /organism="Amasya cherry disease-associated mycovirus" FT /mol_type="genomic RNA" FT /country="Turkey:Amasya" FT /isolation_source="unidentified fungus" FT /note="unclassified putative mycovirus (putative member of FT the family Totiviridae)" FT /db_xref="taxon:284689" FT CDS 36..4922 FT /product="hypothetical protein" FT /note="ORF" FT /db_xref="UniProtKB/TrEMBL:Q1HA36" FT /protein_id="CAJ29960.1" FT /translation="MKSTEGVFSKLRSNSILNYDVGFRGLEEVVKQVAKNETASGSDVE FT AVLADLEVMVYERAQSKDLACKGEKAVALPRDVHANSFIHGVSTGLKKRQWADVTLNSE FT SFLPVDESFDVFDGVLTAGAYSTEKLLISALPCDERVTNGHASVNTFVVAPRNGKVNFR FT DVRSADSEHKNMAKNILTMLTFASLDAEYENAEIEGFVKARQTFPLISTSHIAEFGHGS FT TTKREYDVSTASSNTLINLKTKIDGDQLDLDGCSTTLKCAILIAYQVHPALWNDFFEGL FT VPPSFGGQLPSMQGIMRRAIAELDIQNDELRLLIAETAATTGRVYGMSDESMVEQLTIS FT YARAVPFGDTLFPRNGDSLPAADVSSWQVKGVLTLELAFTRLFSLFAPQTDRNKYERSK FT HYDQLSSAGFALFAKDEEGQFVLPIASIISTNVFRKSVTSTGTVKSQFKARPVGHVLRE FT LVTSDLPLMRKGVASARDVLMADNLLGAKARGRYATDVKSEGSYACSVATEPNEYVSGP FT RDTDGSMLTNVMAARATAGALNSLVGWLDSACVLDGNDRSEVNIMAGCVVGSEARVTTV FT ATELKRYGFELRVSDKLALGVGNPRKDYAFTTNAQETVAARIERTSRQIGKRAATSTFM FT SKLTVACTSTETQPYILCLYRALNCIKLKKGVVTNPRFWHQARIDNNQVIVGSATFGLS FT FSGGSTIDQVVVTSSSLNRPINEFGGFNKKTMRYGVKACELQDPSGKFFIQADIARLGT FT RVSSATYAAMQCGQFVDQESLAEAMDAAATLADDQELEYAWASQEGYNAARALYQKPLS FT STDKRTLKRAVWHACTGFILFVTKACLVYEGGENSTSEVTPAARLDQVHRVYAAYSSRV FT RYVVSLLVGEDANWPNPIGLVHVYQLAVTPGHPKDMLSSDDIHSVLSTPTARVKNGKCT FT RMDAPCQVSCFARLDDLHECRRCKCRVTCALCIKALCLTGYAHDGGRKPNDHETTPATG FT GDILHAKTMGSEHVSELHDTESIVGAKPMDLAPANADVRSELVELASNLLKINGRRPSA FT QVKKLSVGNADEGKNEQGFESLSESDNNAQEIDAESSGDVSMVGETSEQQVRDAIAHSE FT AESRLFDDTADVDDKLFEACSYVPGDASEVGASDVDITPKKSAIRPPMSSRRSSTPTPA FT ASRGLKFDVDLIADILHEPPKMWDQSREFVEQTEPLVSLEQCTALVPMHAGFAMPVCSK FT LSYCDILSDKSALQDELVVNDEIINFKVPEQEEVEMSTSIFAVERSGEWIKLLPQRQKL FT KLSCGRDHSMTGPHWCVLKKQDGNSSLRKIISDAGMTDKLVRSQLIRRIIPGKPSTLYL FT PGSAMFRDVTKNCVCAGCSSFKRTNDPNMVKRSAVDFPIWHYDLGELHSLDIKIPQGQR FT DSIVGDLMENRGAMEQYCAIKPWLSNMLGFMVKPGTVNQVSGYGDFHFSNPRINVSTRP FT MSYEADYNLWLFYRQPLVMHINKIHASLPCCSMGYGDILTFPPDLENGMPFEARMKIDK FT SIVFNSHDDETKMFLIAALASLLWPRPGEEAPQRASLSFSGVMLGDMRHYSMNRIVRDG FT KLTNDSVLRAVTVPDRMDKVEKLSKVRVSDKTIELFSRFRCPETLKYLN" XX SQ Sequence 5121 BP; 1398 A; 1199 C; 1425 G; 1099 T; 0 other; tacgaaaaaa cccaacacta cgaaacgaac tcgcaatgaa atcaactgaa ggggtttttt 60 ctaagttgag aagtaactca atcctcaact acgatgtcgg gttccgaggt ttagaagaag 120 tggtgaagca agtggccaaa aacgaaacgg cctctggttc tgatgtggag gcagttttgg 180 ccgacttgga ggtcatggtt tacgaacgag ctcaatcgaa agacctcgct tgcaaaggcg 240 aaaaggcagt tgcactgcca agagacgtgc acgctaactc attcatccac ggcgtctcga 300 ctgggcttaa gaagcgtcag tgggcagatg tcacgcttaa cagcgagagc tttctgcctg 360 ttgatgagag ctttgatgtt tttgatggcg tgctcacagc tggcgcgtat tcaactgaaa 420 aactgctgat tagcgcgctg ccttgtgatg aacgcgttac aaatgggcac gcctcagtga 480 acacttttgt cgtggcgcca aggaacggca aggtcaattt cagagacgta aggtcggctg 540 attcagaaca caagaacatg gcaaagaaca ttctaacgat gctcacgttt gccagtttgg 600 atgcggaata tgaaaacgct gagattgagg gcttcgttaa agcgaggcaa actttcccac 660 taatatcaac atctcacatt gccgagtttg gccacgggtc aacaacaaag agagagtacg 720 acgtgtcaac cgcgtcaagc aacacgctga tcaacctcaa gactaaaatt gatggtgacc 780 agcttgatct tgatgggtgt tccacgacac taaagtgtgc gatattgatc gcataccagg 840 ttcacccagc cctttggaat gatttttttg aagggcttgt acctccatca ttcggtggtc 900 agctcccaag catgcagggc ataatgcggc gagcgatcgc cgagctggac attcaaaatg 960 atgagctgag actgttgatc gctgagacag ctgccacgac tggtagagtg tacggcatgt 1020 cggatgagtc gatggtggag cagctcacga tatcgtacgc cagggccgtt ccttttggtg 1080 acacgctgtt cccaaggaac ggagacagcc tgcctgctgc tgatgtatcc agctggcaag 1140 ttaaaggcgt gctcacactg gagctagctt tcaccaggct atttagcttg tttgcgcccc 1200 agacagacag gaacaagtac gaaaggagca aacactacga tcagctcagc tcggctggtt 1260 tcgcactgtt tgcgaaagat gaggaaggcc aattcgttct gccaattgcg tccattattt 1320 caacgaacgt tttcaggaag tccgtgactt ctactggcac tgtgaagagc cagttcaaag 1380 caaggccagt tggccatgta ttacgcgaac tggttactag cgacttgccg ctcatgcgta 1440 aaggtgtggc tagtgcaaga gacgttctga tggctgacaa cctactaggt gccaaggcaa 1500 ggggcagata cgctactgac gtcaaatcag aaggtagtta cgcgtgctcg gttgcaacag 1560 agccgaatga gtatgttagc gggcccagag acacagacgg ttcaatgctc accaacgtga 1620 tggccgccag ggctactgca ggggcgttga actcactagt cggttggctg gactccgctt 1680 gcgtcttgga cggcaatgac aggtcagagg tcaacatcat ggctggttgc gtagtcgggt 1740 cagaagcacg tgttaccacg gtagccaccg agctgaagcg ttacggcttt gagctaaggg 1800 tcagcgacaa gctcgctcta ggtgtgggca acccaaggaa agactatgcg tttacgacta 1860 atgctcaaga gacagttgcg gcaaggatag agcgaacaag ccgacaaatc ggcaagcgcg 1920 ctgccacgag cacgttcatg tcgaagctga ctgtggcatg tacatcaacg gaaacgcaac 1980 cctacatttt gtgcttgtac agagcgctca actgcatcaa attgaaaaag ggtgtagtga 2040 cgaacccaag gttctggcat caagctagga ttgacaacaa ccaggtcatc gttggatcag 2100 cgacctttgg tttgagcttc tcaggtggca gcactattga tcaggttgtg gttactagtt 2160 caagcctcaa taggccaatc aatgagtttg gagggttcaa caagaagacg atgcggtacg 2220 gtgtgaaagc ttgcgagcta caagacccaa gtggcaagtt cttcatccag gctgatatag 2280 ccagacttgg tactagagtg tcttctgcca cctatgcagc catgcagtgt gggcagttcg 2340 tagaccagga aagtttggct gaggcaatgg atgccgcagc gacactcgca gatgaccagg 2400 aattggagta tgcatgggca agtcaagaag gctacaacgc agcaagggca ttgtaccaaa 2460 aacccttgtc gagcacggac aaacgcacgc tgaaacgagc agtctggcac gcttgcacag 2520 gtttcatcct tttcgtgacc aaggcttgtc tggtgtacga agggggtgaa aactcaacat 2580 ccgaagtcac accggctgct agacttgacc aggtgcacag ggtgtacgcg gcgtacagta 2640 gcagggtcag gtacgtggtg tcactcctgg ttggcgaaga tgccaactgg ccaaacccaa 2700 ttggtctagt ccacgtctac cagcttgcag tcacgcctgg gcacccgaaa gacatgctgt 2760 cttcggacga cattcactca gttttgagca cacctaccgc gcgagtaaag aacggtaagt 2820 gcacaaggat ggatgcacca tgtcaggtaa gttgctttgc ccgccttgac gacttgcacg 2880 agtgtaggcg gtgcaagtgt cgggtgacat gcgcattgtg catcaaggcg ctgtgtttga 2940 ccggctacgc tcatgatggg ggcaggaaac cgaatgatca tgaaactaca cccgctacgg 3000 ggggcgatat actacatgct aagacaatgg gttcagagca cgtcagtgaa ctgcatgaca 3060 ctgaatcaat cgtgggtgca aaaccaatgg acctggcgcc tgcaaacgct gatgtgcgtt 3120 ctgagttggt cgaactcgca agcaacctgc tcaaaatcaa tggtaggcgc cctagcgctc 3180 aggttaagaa gctgagcgtg ggcaacgctg acgaaggcaa gaacgagcaa ggttttgaaa 3240 gcctgtctga gtcagacaat aacgcacaag agatcgatgc agagtcaagc ggtgacgtca 3300 gcatggtagg tgagacgagc gagcagcaag tcagggatgc aatcgctcac tcagaagcag 3360 aaagtcgact gttcgatgac acggcggacg tggatgacaa actttttgag gcgtgttcat 3420 acgtgccggg tgacgcaagt gaggttggag cgtcggatgt ggatatcact cctaagaaga 3480 gtgcgatacg accaccaatg tcatcaagac gctcatccac gccaacgcct gctgcgtcac 3540 gggggctaaa gttcgatgtt gatctcattg cagacatact gcatgagcca ccaaaaatgt 3600 gggaccagtc acgcgaattt gtcgagcaaa ctgaaccact ggttagcttg gagcagtgta 3660 ctgcactggt gccaatgcac gctggttttg cgatgccagt gtgtagcaag ttgagttact 3720 gcgatatact aagcgacaaa tcagcgctgc aagacgagct cgtggtgaat gatgaaatca 3780 tcaacttcaa ggtaccagag caggaagaag tcgagatgtc aacatcaatc tttgcggttg 3840 aaaggagtgg tgagtggatc aagcttttgc cacagcggca gaagctgaag ctcagttgcg 3900 ggcgagatca ctccatgact gggcctcact ggtgtgtact gaagaaacaa gatggcaact 3960 cgtcactgcg caagataatc agtgatgcag gcatgacgga caaactagtc agatcacaat 4020 tgattcgtag gatcataccc gggaagccat caacactata cttgccaggt agcgcaatgt 4080 tccgggatgt caccaaaaac tgtgtgtgcg cagggtgctc atccttcaag aggaccaatg 4140 accccaacat ggtaaaacgc agcgcagtgg acttcccaat atggcactat gacttggggg 4200 aactacactc attggacatc aagatacccc aaggccagcg tgattcgatc gttggtgact 4260 tgatggagaa tagaggagca atggagcaat actgtgccat caagccctgg ctgtcaaaca 4320 tgctcgggtt catggtcaag ccaggcacag tgaaccaagt tagtgggtac ggtgatttcc 4380 acttcagcaa ccccagaata aacgtcagca cgcgcccgat gagctacgaa gcagactata 4440 acctgtggct gttctaccgc cagccattgg taatgcacat caacaagata cacgcgtcgc 4500 tgccatgctg ctcaatgggt tatggtgaca tcctgacgtt cccgccagac ttggagaatg 4560 ggatgccgtt cgaggcgagg atgaagatag acaaatcgat tgtgttcaac tcacatgatg 4620 atgagactaa gatgtttctg atagcagcgc tggcgagttt actgtggccc agaccagggg 4680 aagaagcccc acaaagggca agcttgagtt tctcaggagt gatgctcggt gacatgagac 4740 actactcaat gaacagaata gtgcgcgatg gtaaactgac gaatgactcc gtactgcgcg 4800 cagtcacagt gccagaccgc atggacaagg tggaaaaact gagcaaggtg agggtcagcg 4860 acaagacaat tgagctgttc tcgcgcttcc ggtgtcccga gacactaaaa tacttgaatt 4920 agagtattgt gccagaagcg cgtcgctatg cataatagat aaaatattaa aaacaacaaa 4980 acagtttgag cagaagaacc cagccgtagg gaacggtact ggtaaatcgt tggattaggc 5040 gcccaacgtc atagtttagt caggctggat ggccgcgtgt ggctcccagg cacgtaaaca 5100 caacactaca gcaatagcac g 5121 //