ID   AM050893; SV 1; linear; genomic RNA; STD; VRL; 1810 BP.
XX
AC   AM050893;
XX
DT   17-JUL-2006 (Rel. 88, Created)
DT   17-JUL-2006 (Rel. 88, Last updated, Version 1)
XX
DE   Sweet potato feathery mottle virus partial gene for polyprotein, genomic
DE   RNA, isolate Pink-2C
XX
KW   coat protein; nuclear inclusion body protein; polyprotein.
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1810
RA   Tairo F.D.;
RT   ;
RL   Submitted (19-JUL-2005) to the INSDC.
RL   Tairo F.D., Plant Biology and Forestry Genetics, Swedish University of
RL   Agric Sciences, P.O. Box 7080 SE-750 07, Uppsala, SWEDEN.
XX
RN   [2]
RA   Tairo F.D., Jones R.A.C., Valkonen J.P.T.;
RT   "Molecular resolution of potyvirus complexes and phylogenetic analysis of
RT   sweet potato virus Y infecting Sweetpotatoes in Western Australia";
RL   Unpublished.
XX
DR   MD5; 19ee925a9a3fcc1a801d86e4ff5c1a18.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1810
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /isolate="Pink-2C"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia:East Kimberley"
FT                   /isolation_source="Ipomoea batatas"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1587
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q0W9B6"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q0W9B6"
FT                   /protein_id="CAJ19390.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVYYTLLKLGVLELEISERCVFFANG
FT                   DDLLIAMRPDTAHLLDNFGECFAELGLNYDFSSRTTKKEELWFMSHCGVKRDGIYIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVEAWGYDELLHQIRKFYAWVLGQAPYSELAR
FT                   TGKAPYIAETALRSLYTGVQPSADDLIEYTRVLNEMYDDSLLQDSELTVYHQSGNPPEF
FT                   KDAGANPPAPKPKGAFTAPEITEITEPEDSRQAALREAKQKQPAVTPESYGRDTGEKPM
FT                   RSISPQRVKDKDVNVGTTGTFLVPRVKLHTSKMRQPRVNGISVVNLQHLTTYEPEQHNI
FT                   GNTRSTQEQFQAWYEGVKGDYGVNDAGMSILLNGLMVWCIENGTSPNINGVWTMMDGDE
FT                   QVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARY
FT                   AFDFYELHSTTPTRAKEAHMQMKAAALKNAHNRLFGLDGNVSTQEEDTERHTATDVTRN
FT                   IHNLLGMRGVH"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT   mat_peptide     646..1584
FT                   /product="coat protein"
FT   3'UTR           1588..1810
XX
SQ   Sequence 1810 BP; 549 A; 361 C; 430 G; 470 T; 0 other;
     gggaataata gtgggcaacc atcaaccgtc gtggacaata cattgatggt tgtgctagcc        60
     gtctactaca ctttgttgaa attgggtgtt ttggagctcg agatcagtga acggtgtgta       120
     ttcttcgcaa acggggatga tttactgata gctatgagac cagatacagc tcatcttttg       180
     gataacttcg gtgagtgctt tgctgagctt gggcttaact atgacttctc atcaagaaca       240
     actaagaagg aagaattatg gttcatgtct cactgtggag tcaaacgaga tggaatatac       300
     attccaaaac tcgaacctga acgaatagta tctattcttg aatgggatag atcacatgag       360
     cctatacaca ggctcgaagc aatttgtgct gcaatggtgg aagcgtgggg ttatgacgaa       420
     cttctccacc aaattagaaa attctatgca tgggtcttgg gacaagcacc atacagtgaa       480
     ctagcacgaa ctggaaaggc cccatatatt gctgaaactg cacttagatc actgtacact       540
     ggagtgcaac ctagcgctga cgatctcatc gagtacacac gtgttcttaa cgagatgtat       600
     gatgatagcc ttcttcaaga cagtgagtta acggtgtatc atcaatctgg taacccccct       660
     gaatttaaag atgcaggtgc gaacccacca gcaccaaagc caaaaggggc atttacagca       720
     ccagaaatca cagaaattac tgagccggag gattccagac aagctgcgct tcgcgaagct       780
     aaacagaaac aacctgctgt cacacccgaa tcatacggta gggacacagg tgagaaacct       840
     atgcgttcta tttcaccaca aagggtgaaa gacaaagacg tcaacgttgg cacgacaggc       900
     acatttttgg tgccacgagt taagctccat actagcaaaa tgcgccaacc tagagtcaat       960
     ggaatctctg tagtaaactt acaacacctc acaacttatg aacctgagca gcataacatt      1020
     gggaatacac gctcaactca ggaacagttt caagcatggt atgaaggtgt taagggtgat      1080
     tatggtgtta atgacgctgg aatgtcaatc ttgttgaatg gattgatggt atggtgcata      1140
     gagaatggaa catccccaaa tataaatggc gtttggacga tgatggatgg ggatgaacaa      1200
     gtgacgtacc ccataaagcc attactggat catgcagtgc ctacttttag gcaaatcatg      1260
     acacacttca gtgacgttgc tgaagcgtat atagaaatga ggaatcgcac taaggcatat      1320
     atgcctaggt atggattaca acgtaacttg actgatatga gtcttgcgcg atatgcattt      1380
     gatttctatg agctgcactc aacaacacct acacgtgcta aagaagcaca catgcagatg      1440
     aaagcagctg cacttaagaa tgcgcataat cggttgtttg gtttagatgg aaacgtctca      1500
     acgcaagaag aggatacgga gaggcacact gcgactgatg ttactagaaa tatacataac      1560
     ctcttaggaa tgaggggtgt gcactaggtg gaactttgca ctgtatttat ttacttatgt      1620
     ggtttttagt atgcctttat tttaaattcg tgtccttcag tcccgacaga gatggttggg      1680
     tgtattgaca gagtgggctt ttagcctggt ccatacactc gagaaatttc tggtctatta      1740
     cgtatcataa gggactctta aaagtgagga gtacctcgta agaaaagcct ttttggttcg      1800
     tgatcgagcc                                                             1810
//