ID   AM050887; SV 1; linear; genomic RNA; STD; VRL; 1857 BP.
XX
AC   AM050887;
XX
DT   17-JUL-2006 (Rel. 88, Created)
DT   17-JUL-2006 (Rel. 88, Last updated, Version 1)
XX
DE   Sweet potato virus Y partial gene for polyprotein, genomic RNA, isolate
DE   Pink1
XX
KW   coat protein; nuclear inclusion body protein; polyprotein.
XX
OS   Sweet potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-1857
RA   Tairo F.D.;
RT   ;
RL   Submitted (19-JUL-2005) to the INSDC.
RL   Tairo F.D., Plant Biology and Forestry Genetics, Swedish University of
RL   Agric Sciences, P.O. Box 7080 SE-750 07, Uppsala, SWEDEN.
XX
RN   [2]
RA   Tairo F.D., Jones R.A.C., Valkonen J.P.T.;
RT   "Molecular resolution of potyvirus complexes and phylogenetic analysis of
RT   sweet potato virus Y infecting Sweetpotatoes in Western Australia";
RL   Unpublished.
XX
DR   MD5; 2a156ab6a0f1ec4600aadedc9ad2d091.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1857
FT                   /organism="Sweet potato virus Y"
FT                   /isolate="Pink1"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia:Perth"
FT                   /isolation_source="Ipomoea batatas"
FT                   /db_xref="taxon:225962"
FT   CDS             <1..1644
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q0W9C2"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q0W9C2"
FT                   /protein_id="CAJ19384.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAMTYSLCKLNIKPENHDQVCIYFANG
FT                   DDLLLAIDPTYEWILDSLEKLFRELGLNYDFSSRTNDKEELWFMSHRGMKRDGIYIPKL
FT                   EPERIVSILEWDRASEPVHRLEAICAAMVEAWGYDDLLHHIRKFYAWILDQAPYSELAR
FT                   VGKAPYIAETALKALYTCVEPSAEDLSEYVRVLNLMYDDAVESNDCEPVYHQSGTEETK
FT                   DAGTPTPAKSVKTRTGQTRPLKAPEGSTSPTDPPPPTVEEIIEEETPAQKALREARGKQ
FT                   PATQPSYTYGRDTGPRSPRQVTTTSRVRDRDVNAGTVGTFIVPRLQITSSKKRLPIVDG
FT                   RPVINLDHLAVYDPEQTNLANTRSTQEQFKAWYEGVKGDYGVSDAEMSILLNGLMVWCI
FT                   ENGTSPNINGMWVMMDGEEQVTYPIKPLLDHAVPTFRRIMTHFSDIAEAYIEKRNRIKA
FT                   YMPRYGLQRNLTDMSLARYAFDFYELHSNTPVRAREAHMQMKAAALKNAQNRLFGLDGN
FT                   VSTQEEDTERHTTTDVTRNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT   mat_peptide     646..1641
FT                   /product="coat protein"
FT   3'UTR           1588..1810
XX
SQ   Sequence 1857 BP; 619 A; 349 C; 423 G; 466 T; 0 other;
     ggcaataaca gcgggcaacc ttctacagtg gtggacaaca cacttatggt tgttttggct        60
     atgacttatt cattgtgtaa acttaatatt aaaccagaaa accatgatca agtgtgtatt       120
     tattttgcaa atggtgatga cctattatta gccatagatc ccacatatga atggattctt       180
     gattcactcg aaaaattgtt cagggagctt ggacttaatt acgatttttc atcaagaaca       240
     aatgacaagg aggagctgtg gttcatgtct cacagaggaa tgaaaagaga tggtatttac       300
     ataccaaaac tagaacctga gagaattgtg tcaatactag agtgggatag agcaagtgaa       360
     ccagtgcata gattggaagc tatttgtgct gcgatggtcg aagcatgggg atatgatgat       420
     ttgttacacc atatccgcaa attctatgca tggatccttg atcaggcacc atatagcgaa       480
     cttgctcgag taggcaaagc tccatatata gcagagacag cactgaaagc tctgtacaca       540
     tgtgttgaac catcagctga agatttgtcc gagtatgttc gtgttttgaa cttgatgtat       600
     gatgatgctg ttgaatcgaa tgattgtgag ccagtctacc atcagtcagg cactgaagaa       660
     acaaaagacg ctggaacccc aacaccagca aaatcagtta agacaagaac aggacaaact       720
     cgaccgctta aagcaccaga agggagcacg agtccaacag atccaccacc tccaacagtt       780
     gaagagataa ttgaagaaga aacaccagca caaaaagcat tgagggaagc ccgtggcaag       840
     caaccagcaa cacaaccctc atacacttat gggcgagaca caggaccgcg tagcccaagg       900
     caagttacaa caacaagcag agttagggat agagatgtta atgctggaac agtagggacg       960
     tttatagttc caagacttca aattacatca agcaagaaga gattgccaat agttgacgga      1020
     cgtccagtaa tcaacctgga tcacttggca gtttacgatc cagagcaaac aaatcttgca      1080
     aataccagat caacacaaga acaatttaag gcatggtatg aaggtgtgaa gggtgattat      1140
     ggggtatctg atgctgaaat gagcatactc cttaatggcc tcatggtttg gtgtattgag      1200
     aatggtacat caccgaatat taatggaatg tgggtgatga tggacggaga agaacaagta      1260
     acttatccaa taaaacctct attggatcat gctgtcccca catttagacg gataatgaca      1320
     cacttcagcg acatagctga agcgtacatt gaaaagagaa acaggataaa ggcctatatg      1380
     ccaagatatg gcctacagag gaatttgact gatatgagtc ttgcgcggta tgcattcgat      1440
     ttctatgaac tccactcaaa cacaccagta agagcaaggg aggcacatat gcaaatgaaa      1500
     gcagcagctt taaagaatgc acagaatcgc ctgtttggtt tggatggaaa cgtctccacg      1560
     caagaagaag acacggagag gcatacaacg actgatgtta caagaaatat acataacctg      1620
     ttaggaatga gaggtgtgca gtaaacaata tattgctcgt acttttaatt tcagttggtc      1680
     tttaatttaa attcgtgtct ttcagtcccg aagagtgttg gttatatgta gtaactatgt      1740
     gtggttgtac caccgttgct acatataaga aaacctcttt ctattacgta tcataaggga      1800
     ctcttaaaag tgagtctttg actcgtaaga aaagcctttt tggttcgtga tcgagcc         1857
//