ID   AM050143; SV 1; circular; genomic DNA; STD; VRL; 2610 BP.
XX
AC   AM050143;
XX
DT   21-JUL-2005 (Rel. 84, Created)
DT   25-JUL-2006 (Rel. 88, Last updated, Version 2)
XX
DE   Tobacco leaf curl Cuba virus AV1 gene, AC1 gene, AC2 gene and AC3 gene
XX
KW   AC1 gene; AC2 gene; AC3 gene; AV1 gene; coat protein; rep gene;
KW   replication associated protein; replication enhancement protein;
KW   Trans-activating protein.
XX
OS   Tobacco leaf curl Cuba virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2610
RA   Ramos P.L.;
RT   ;
RL   Submitted (18-JUL-2005) to the INSDC.
RL   Ramos P.L., Plantas, Ctro de Ing Genetica y Biotecnologia, P.O. Box 6162,
RL   Habana, 10600, CUBA.
XX
RN   [2]
RX   DOI; 10.1111/j.1365-3059.2006.01368.x.
RX   AGRICOLA; IND43821657.
RA   Moran Y.M., Ramos P.L., Dominguez M., Fuentes A.D., Sanchez Y.,
RA   Crespo J.A.;
RT   "Tobacco leaf curl Cuba virus, a new begomovirus infecting tobacco
RT   (Nicotiana tabacum) in Cuba";
RL   Plant Pathol. 55(4):570-570(2006).
XX
DR   MD5; 91b67bf0a042990516918f5f2bd60f77.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2610
FT                   /organism="Tobacco leaf curl Cuba virus"
FT                   /host="Nicotiana tabacum"
FT                   /mol_type="genomic DNA"
FT                   /country="Cuba:Taguasco"
FT                   /db_xref="taxon:336987"
FT   CDS             182..937
FT                   /transl_table=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q4GX10"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q4GX10"
FT                   /protein_id="CAJ18310.1"
FT                   /translation="MPKRDAPWRPMAGTSKVSRNANYSPRAGIGPRVNRASEWVNRPMY
FT                   RKPRIYRTLRTPDIPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRR
FT                   CVKSMDILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRYQVMHRFYGKVTGGQYASNEQAIVRRFWKVNNYVVYNHQEAAKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSIMN"
FT   CDS             complement(934..1332)
FT                   /transl_table=1
FT                   /gene="AC3"
FT                   /product="replication enhancement protein"
FT                   /db_xref="GOA:Q4GX09"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q4GX09"
FT                   /protein_id="CAJ18311.1"
FT                   /translation="MDLRTGELITAHQAENGVYIWEIENPLYFKIYRVEDLLYTMTRVY
FT                   HIQIRFNHNLRRALHLHKAYLNFQVWTTSMTASGSTYLVRFTYLVNMYLDQLGVISINN
FT                   VIRAVRFATDRSYVNYVLENHSIKFKIY"
FT   CDS             complement(1079..1468)
FT                   /transl_table=1
FT                   /gene="AC2"
FT                   /product="trans-activating protein"
FT                   /db_xref="GOA:Q4GX08"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q4GX08"
FT                   /protein_id="CAJ18312.1"
FT                   /translation="MRSSSPSHPPSIKIAHRQAKRRAVRRRRIDLRCGCSIYFHIDCTG
FT                   HGFTHRGTHHCTSGGEWRVYLGDRKSPIFQDIQSRGSAIHHDKSVPHPDTVQPQPEESV
FT                   ASPQSLPELPSLDDIDDSFWVNLFS"
FT   CDS             complement(1380..2465)
FT                   /transl_table=1
FT                   /gene="AC1"
FT                   /product="replication associated protein"
FT                   /note="rep"
FT                   /db_xref="GOA:Q4GX07"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q4GX07"
FT                   /protein_id="CAJ18314.1"
FT                   /translation="MPRKGSSIANAKNYFLTYPQCSLTKEEALSQLQKLNTPVNKKFIK
FT                   ICRELHQDGKPHLHVXIQXEGKYNCTNNRFFDLVSPXRLAHFHPNIQGXKSSSDVKSYI
FT                   DKDGDTLEWGKFQIDGRSARGGCQTTNDTYAKALNASSAEEALQIIKEEQPQHFFLQHH
FT                   NLVANAHRIFQKAPEPWVPPFQLSSFTNVPEEMQDWADEYFGRGSAARPERPVSLIVEG
FT                   DSRTGKTMWARALGPHNYLSGHLDFNARVFSNEVEYNVIDDVAPHYLKLKHWKELLGAQ
FT                   KDWQSNCKYGKPVQIKGGIPAIVLCNPGEGASYKDFLNKEENASLKNWTLKNAVFITLT
FT                   SSLYQDSTQAGQEESSQEETH"
XX
SQ   Sequence 2610 BP; 645 A; 602 C; 616 G; 743 T; 4 other;
     accggatggc cgcgcgcccc cccctggtgc cgtacactca cgcgcgcccc gcctttctca        60
     ctcgcgctat cgtccaatca tattgcgcct gccgcgccta tttatttcaa acaacttggg       120
     ctccaagttg ttgcgcggtt tataaatttt aagttgtttg ggcctgtatc ttcagcccaa       180
     gatgcctaag cgcgatgccc catggcgccc gatggcagga acttcgaagg taagtcgcaa       240
     tgcaaattac tctccccgtg caggtattgg gccaagagtg aacagggcat cggaatgggt       300
     taacaggcct atgtacagga agcccaggat ataccggact ctacgaacgc ccgatattcc       360
     tagaggctgt gaaggccctt gcaaggtcca gtcctatgaa caacgccacg atatctctca       420
     cgtgggtaag gtgatgtgta tatctgatgt cacacgtggt aatggcatta cccaccgtgt       480
     gggtaagcgg cgttgtgtta agtctatgga tatactaggt aagatatgga tggatgagaa       540
     catcaagctc aagaaccaca cgaacagtgt tatgttctgg ttggtcagag accgtagacc       600
     gtatgggaca cccatggatt ttggacaggt gttcaacatg ttcgacaacg agcccagcac       660
     tgccacggtt aagaacgatc tacgtgatcg ttaccaggtg atgcaccggt tctatggtaa       720
     ggtcacaggt ggacagtatg ccagcaacga gcaggctatt gtcaggcgat tctggaaggt       780
     caacaactat gtcgtctaca accaccagga agctgccaag tacgagaacc acactgagaa       840
     cgcgctgtta ttgtacatgg catgtacaca tgcctctaac cccgtatatg caactctgaa       900
     gattcgaatc tatttttatg attcgataat gaattaataa attttgaatt ttattgaatg       960
     attttccagt acataattca catacgatct gtctgttgca aaacgaacag ctctaattac      1020
     attgttaatg gaaatcactc ctaactgatc taaatacata ttaactaaat atgtaaacct      1080
     aactaaataa gttgacccag aagctgtcat cgatgtcgtc cagacttgga agttcaggta      1140
     agctttgtgg agatgcaacg ctctcctcag gttgtggttg aaccgtatct ggatgtggta      1200
     cactcttgtc atggtgtata gcagatcctc tactctgtat atcttgaaat ataggggatt      1260
     ttctatctcc cagatataca cgccattctc cgcctgatgt gcagtgatga gttccccggt      1320
     gcgtaaatcc atgtcccgtg cagtctatat ggaagtatat ggagcacccg cacctcagat      1380
     caatgcgtct cctcctgact gctctcctct tggcctgcct gtgtgctatc ttgatagagg      1440
     gaggatgtga gggtgatgaa gaccgcattc tttaacgtcc agtttttgag ggatgcgttt      1500
     tcctctttgt tgaggaaatc tttatagctg gcaccctcac caggattgca aagcacgata      1560
     gctgggatcc cacctttaat ttgaactggc ttgccgtatt tgcaattgga ttgccagtct      1620
     ttttgtgcgc ccaggagctc tttccagtgc tttagcttta aatagtgcgg tgcgacgtca      1680
     tcaatgacgt tatactccac ttcgtttgaa aagacacgag cattgaagtc cagatgtcca      1740
     ctgagatagt tatgtgggcc taaggcacgt gcccacatcg tcttacccgt ccttgaatca      1800
     ccttcgacta tgagacttac tggtctttcc ggccgcgcag cggaacctct tccaaaatac      1860
     tcatcggccc agtcttgcat ctcttcagga acgttagtga aagaggagag ttgaaacgga      1920
     gggacccatg gttccggagc cttttgaaag atccgatgag catttgctac caaattatga      1980
     tgctgaagga aaaaatgttg aggctgttcc tcttttatta tttgcagagc ttcctcagca      2040
     gaggaggcat tcaacgcctt ggcatatgtg tcattagttg tttggcagcc tcctctagca      2100
     cttcttccgt caatctggaa ctttccccat tcaagtgtat ctccgtcctt gtcgatgtag      2160
     gacttgacgt cggagcttga tttanctccc tgtatgttcg gatggaaatg tgctaaccga      2220
     natggggaga ccagatcgaa gaatctgtta ttcgtgcagt tgtatttgcc ctcnaattgt      2280
     ataancacgt gcagatgagg cttcccatct tgatggagct ctctgcagat tttgatgaac      2340
     ttcttgttca ctggagtatt tagtttttgt aattgggaaa gtgcctcctc tttggtgagg      2400
     gagcactgtg gataagtaag gaaatagttt ttggcattag ctattgaaga acccttccgt      2460
     ggcatttttg taatatgaag ggtgttcccc caattgatct ggctccaaac ttctctctga      2520
     attgggggaa ctgggggtac atttatacta gaaccctcaa tagaactctc aatcgtgtgc      2580
     atacacgtgg cggccatccg ctataatatt                                       2610
//