ID   AM048831; SV 1; linear; genomic RNA; STD; VRL; 1913 BP.
XX
AC   AM048831;
XX
DT   08-JAN-2007 (Rel. 90, Created)
DT   08-JAN-2007 (Rel. 90, Last updated, Version 1)
XX
DE   Cucumber mosaic virus 3a gene and CP gene for coat protein, genomic RNA,
DE   isolate VN-Bavi
XX
KW   3a gene; 3a protein; coat protein; CP gene.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-1913
RA   Chu H.H.;
RT   ;
RL   Submitted (08-JUL-2005) to the INSDC.
RL   Chu H.H., Plant Cell Technology, Institute of Biotechnology (IBT), VAST,
RL   Hoang Quoc Viet Str. 18, Cau Giay, Hanoi, 10000, VIET NAM.
XX
RN   [2]
RA   Chu H.H., Nguyen H.M., Pham V.T., Nghiem M.N., Tran K.D., Tran V.T.,
RA   Le B.T.;
RT   "Genetic diversity among Vietnam isolates of Cucumber mosaic virus";
RL   Unpublished.
XX
DR   MD5; 9f49c434124a0878022462a221f3a403.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1913
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Nicotiana tabaccum"
FT                   /isolate="VN-Bavi"
FT                   /mol_type="genomic RNA"
FT                   /country="Viet Nam:Ha Tay province"
FT                   /db_xref="taxon:12305"
FT   CDS             3..839
FT                   /gene="3a"
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:A1IU57"
FT                   /protein_id="CAJ15159.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPDAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDAGELSSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLKIYLADLGDKELSPIDRQCVTLHNHDLPALVSFQPTYDCPMEIVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYVLTDSKINQNARSESEENVESPPIVIGSPSASRSEAFRPQVVNGL"
FT   CDS             1135..1791
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9WAB3"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9WAB3"
FT                   /protein_id="CAJ15160.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 1913 BP; 454 A; 456 C; 446 G; 557 T; 0 other;
     gcatggcttt ccaaggtacc agtaggactt taactcaaca gtcctcagcg gctacgtctg        60
     atgaacttca aaagatatta tttagccctg acgccatcaa gaaaatggct actgagtgtg       120
     acctaggccg gcatcattgg atgcgcgctg ataacgctat ttcagtccgg cccctcgttc       180
     ccgaagtaac ccacggtcgt attgcttctt tctttaagtc tggatatgac gctggtgaat       240
     tgagttctaa aggatacatg agcgttcctc aggtattgtg tgctgttact cgaacagttt       300
     ctaccgatgc cgaaggatct ttgaaaattt acctagctga tttaggcgat aaggagttat       360
     ctcccataga tagacaatgc gtcacattac ataaccatga tcttcccgct ttagtgtcat       420
     tccagccgac gtatgactgt cctatggaaa ttgttgggaa ccgtaagcgg tgttttgctg       480
     ttgttatcga aagacatggt tacattgggt ataccggcac cacagccagc gtgtgtagta       540
     attggcaagc acgattttct tctaagaaca ataactacac tcatatcgcg gctgggaaga       600
     ctctagtact gccgttcaac aggttagctg agcagacgaa accatcagcc gtcgcccgcc       660
     tgctgaagtc gcaactgaac aatatagaat cttcgcagta tgttttaaca gattcgaaga       720
     ttaatcagaa tgcgcgcagt gagtccgagg aaaatgttga gagccctcct atcgtaatcg       780
     ggagtccttc cgcgtcccgc tccgaagcct ttagaccgca ggtggttaac ggtctttagt       840
     gtcttcgttg cgtattagta tataagtatg tgtgagtctt aacataatac tatatctata       900
     gtgtcctgtg tgagttgata cagtagacaa ctgtgacgcg atgtcgtgtt gagaagagag       960
     cacatctggt cttagtaaac ccacaacata tctttgaggt tcaattcctc tcgttccctg      1020
     ttgggctcct ttactttttc atggatgctt ctccacgaga ttacgtttcg tctacttatc      1080
     ttagagtatt gtgctgtttt tctctttgtg tagtagattg agtcgagtcg agtcatggac      1140
     aaatctgaat caaccagtgc tggtcgtaac cgtcgccgtc gtccgcgtcg cggttcccgc      1200
     tccgcctcct cctccgcgga tgctaacttt agagtcttgt cgcaacagct ttcgcgactt      1260
     aataagacgt tagcagctgg tcgtccaact attaaccacc caacctttgt gggtagtgag      1320
     cgttgtaaac ccgggtacac gttcacatct atcaccctga aaccaccgaa aatagaccgt      1380
     gggtcttatt atggtaaaag gttgttgctt cctgattcag tcacagagtt cgataagaag      1440
     cttgtttcgc gcattcaaat tcgagttaat cctttgccga aatttgattc taccgtgtgg      1500
     gtgacagtcc gtaaagttcc tgcctcctcg gacttatccg ttgccgccat ctctgctatg      1560
     ttcgcggacg gagcctcacc ggtactggtt tatcagtatg ctgcatccgg agtccaagcc      1620
     aacaataaat tgttgtatga tctttcggcg atgcgcgctg atattggtga catgcgaaag      1680
     tatgccgttc tcgtgtactc aaaagacgat gcactcgaga cggatgagct agtacttcat      1740
     gtcgacattg agcaccaacg cattcccacg tcaggggtgc tcccagtttg aactcgtgtt      1800
     ttcccggaac cctctctcca atttctgtgg cgagagctga gttggtagtg ttgctataaa      1860
     ctgcctgaag tcactaaacg ctttgcggtg aacgggttgt ccatccagct tac             1913
//