ID   AM048830; SV 1; linear; genomic RNA; STD; VRL; 1908 BP.
XX
AC   AM048830;
XX
DT   08-JAN-2007 (Rel. 90, Created)
DT   08-JAN-2007 (Rel. 90, Last updated, Version 1)
XX
DE   Cucumber mosaic virus 3a gene and CP gene for coat protein, genomic RNA,
DE   isolate VN-Caobang
XX
KW   3a gene; 3a protein; coat protein; CP gene.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-1908
RA   Chu H.H.;
RT   ;
RL   Submitted (08-JUL-2005) to the INSDC.
RL   Chu H.H., Plant Cell Technology, Institute of Biotechnology (IBT), VAST,
RL   Hoang Quoc Viet Str. 18, Cau Giay, Hanoi, 10000, VIET NAM.
XX
RN   [2]
RA   Chu H.H., Nguyen H.M., Pham V.T., Nghiem M.N., Tran K.D., Tran V.T.,
RA   Le B.T.;
RT   "Genetic diversity among Vietnam isolates of Cucumber mosaic virus";
RL   Unpublished.
XX
DR   MD5; 703c3277595fd7eca793577230c39e3c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1908
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Nicotiana tabaccum"
FT                   /isolate="VN-Caobang"
FT                   /mol_type="genomic RNA"
FT                   /country="Viet Nam:Cao Bang province"
FT                   /db_xref="taxon:12305"
FT   CDS             3..842
FT                   /gene="3a"
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:A1IU55"
FT                   /protein_id="CAJ15157.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPEAIKKMAAECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIVSFFKSGYDAGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDKQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNMGSSQYVLTDSKINQNARSESEELNVESPPVAIGSSSASRFESFRPQVVNGL"
FT   CDS             1137..1793
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A1IU56"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:A1IU56"
FT                   /protein_id="CAJ15158.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNRT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 1908 BP; 437 A; 457 C; 456 G; 558 T; 0 other;
     gcatggcttt ccaaggtacc agcaggactt taacccaaca gtcctcagcg gctacgtctg        60
     acgaacttca aaagatatta tttagccctg aagccattaa gaaaatggct gctgagtgtg       120
     acctaggccg gcatcattgg atgcgcgctg ataatgctat ttcagtccgg cccctcgttc       180
     ccgaagtaac ccacggtcgt attgtttcct tctttaagtc tggatatgat gctggtgaac       240
     tgtgctctaa aggatacatg agcgtccctc aggtgttgtg tgctgttact cgaacagttt       300
     ctaccgatgc tgaagggtcc ttgagaattt acctagctga tttaggcgat aaggagttat       360
     ctcccataga taaacaatgc gttacattac ataaccatga tcttcccgct ttagtgtctt       420
     tccaaccgac gtatgattgt cctatggaga cagttgggaa tcggaagcgg tgttttgctg       480
     tcgttatcga aagacatggt tatattgggt ataccggcac cacagctagc gtgtgtagta       540
     attggcaagc acggttctct tctaagaaca acaactacac tcacatcgca gctgggaaga       600
     ctctagtact gccattcaac agattagctg agcagacgaa accgtcagcc gtcgctcgcc       660
     tgttgaagtc gcaattgaat aatatgggat cttcgcaata cgttttgacg gattcgaaga       720
     ttaatcaaaa tgcgcgcagt gagtccgagg aattgaatgt tgagagccct cctgtcgcaa       780
     tcgggagttc ttccgcgtcc cgcttcgaat cctttagacc gcaggtggtt aacggtcttt       840
     agtgctttcg ttgcgtatta gtttaagtat atgtctgttt gtacatatta ctataactat       900
     agtgtcctgt gtgggttgat acagtagaca actgtgacgc gatgtcgtgt tgagaaggga       960
     acacatctgg ttctagtaag ccacatcatt agttttgagg ttcaattcct cttactccct      1020
     gttgtgcccc ttactttttc atggatgctt ctccacgaaa ttgcgtttcg tctactagat      1080
     ctttgagagt ctgtgttgtg ttttctcttt gtgtcgtaga tttatcgagt cgagtcatgg      1140
     acaaatccga atcaaccagt gctggtcgta accggcgacg tcgtccgcgt cgtggttccc      1200
     gctccgcttc ctcctccgcg gatgccaact ttagagtcct gtcgcaacaa ctttcgcgac      1260
     ttaacaggac gttggcggct ggtcgtccta ctattaacca cccaaccttt gtagggagtg      1320
     aacgctgtaa acctgggtat acgttcacgt ctattaccct gaagccaccg aaaatagacc      1380
     gcgggtctta ttatggtaaa aggttgttgc tacctgattc ggtcacggaa ttcgataaga      1440
     aacttgtttc gcgcattcaa attcgagtta atcctctgcc gaaatttgat tctaccgtgt      1500
     gggtgacagt ccgtaaagtt cctgcctcct cggacttgtc cgttgccgcc atctctgcta      1560
     tgttcgcgga cggagcctca ccggtactgg tttatcagta tgctgcatcc ggagtccaag      1620
     ccaacaacaa attgttgtat gatctttcgg cgatgcgcgc tgatattggt gacatgcgaa      1680
     agtacgccgt gctcgtgtat tcaaaagacg atgccctcga gacggatgag ttagtacttc      1740
     atgtcgacat cgagcaccaa cgtattccca catctggggt gctcccagtt tgaatccgtg      1800
     tttcccagga ccctccctcc ttcggcggga gctgagttgg cagttttgct ctaaactgtc      1860
     tgaagtcact aaacgtttta cggtgaacgg gttgtccatc cagcttac                   1908
//