Dbfetch
ID AM042009; SV 1; linear; genomic RNA; STD; VRL; 1261 BP. XX AC AM042009; XX DT 04-NOV-2005 (Rel. 85, Created) DT 04-NOV-2005 (Rel. 85, Last updated, Version 1) XX DE Pepino mosaic virus TGBp1, TGBp2 and TGBp3 genes, genomic RNA, strain US2, DE isolate Mu 04.10US XX KW complete genome; TGBp1 gene; TGBp2 gene; TGBp3 gene; KW triple gene block protein 1; triple gene block protein 2; KW triple gene block protein 3. XX OS Pepino mosaic virus OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-1261 RA Pagan I.; RT ; RL Submitted (04-JUL-2005) to the INSDC. RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria, RL Madrid, 28040, SPAIN. XX RN [2] RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M., RA Jorda C., Garcia-Arenal F.; RT "Genetic structure of the population of Pepino mosaic virus infecting RT tomato crops in Spain"; RL Unpublished. XX DR MD5; b210e2305105ad64be584b9bcf1e3b6c. XX FH Key Location/Qualifiers FH FT source 1..1261 FT /organism="Pepino mosaic virus" FT /host="Lycopersicon esculentum (tomato)" FT /strain="US2" FT /isolate="Mu 04.10US" FT /mol_type="genomic RNA" FT /country="Spain:Murcia" FT /db_xref="taxon:112229" FT CDS 60..764 FT /gene="TGBp1" FT /product="triple gene block protein 1" FT /db_xref="GOA:Q334F9" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q334F9" FT /protein_id="CAJ17465.1" FT /translation="MERSTLINLLLLHKFEHKINTEGIIVVHGIAGTGKTTLLRTLFSA FT YPSLVIGSPRPCYLDKANKISQVCLSCFPNTLCDIVDEYHLLESFPEPKLAIFGDPCQC FT TYIERLRTPNYTSFRTHRFGKSTAALLNKLFDLNIESVKAQDDTVEYFDPFAVDPSEHI FT SASEKEVLEFAGDLVETTSSEELAGLEFSEVTFYCTTLAGAVQENPAKTFISLTRHTSK FT LTIGELNARSDS" FT CDS 745..1116 FT /gene="TGBp2" FT /product="triple gene block protein 2" FT /db_xref="GOA:Q699Z7" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q699Z7" FT /protein_id="CAJ17466.1" FT /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL FT PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSISRNTHQH FT HCYNTHSATQTGQSVPGHH" FT CDS 968..1216 FT /gene="TGBp3" FT /product="triple gene block protein 3" FT /db_xref="GOA:Q334E8" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q334E8" FT /protein_id="CAJ17467.1" FT /translation="MSSYLSSFLHWVLSSPINLVLALAVILTSIIATTHILQPKQVNQC FT QVIIDGAAIVITNCPNTPEVLKAINFSPWNGLSFPQL" XX SQ Sequence 1261 BP; 383 A; 293 C; 208 G; 377 T; 0 other; cttgggagaa gagtccccca agatcaaccc attaaggggt taagtttccc cagtttgaaa 60 tggaaagatc aactttgatc aatttacttc tgttacacaa atttgaacac aagattaaca 120 ctgaaggaat cattgttgtg cacggaattg ctggaactgg gaaaaccaca ttgcttagga 180 ctttattttc tgcgtaccct agcttagtta taggttcacc taggccttgt tacttagata 240 aagctaataa aatttcacaa gtttgccttt cttgttttcc aaataccttg tgtgacattg 300 tcgacgagta ccatctctta gaaagttttc ctgaaccaaa actagccatt tttggtgacc 360 cctgtcagtg cacttacatt gaaaggttga gaacacccaa ctacacatcc ttcagaacac 420 accgatttgg caaatccact gctgctctac taaacaagtt atttgatctt aacattgagt 480 cagtcaaagc acaagacgac acagtagaat actttgatcc tttcgcagtg gacccctctg 540 aacacatttc tgcttcagaa aaagaagttt tggaatttgc aggtgatcta gttgagacta 600 caagctctga agaactagct ggtctcgagt ttagtgaagt tactttctac tgtaccacac 660 ttgctggtgc tgttcaagaa aatcctgcca aaaccttcat ttcactcact agacacactt 720 caaagctcac aattggtgaa ctaaatgcca ggtctgactc ctagagctga tcttactgac 780 acgtataaaa tcattgctat agcctttcta ctgtcagctt gcatttactt ccaaaacagt 840 cattatcaac cagttgcagg tgataacttg cacagactac cctttggtgg tcagtatcaa 900 gacggaacta agaagatttc ttactttccg cagcaacaat cctactttca ctcaggaaac 960 aagcttaatg tcctcatact tatcttcatt cttacactgg gtattgtcct caccaataaa 1020 tttagtttta gcattagccg taatactcac cagcatcatt gctacaacac acattctgca 1080 acccaaacag gtcaatcagt gccaggtcat cattgacggt gcagccatag ttataacaaa 1140 ttgtccaaac acacccgaag ttcttaaagc aatcaacttc tccccttgga acgggttaag 1200 ttttcctcaa ttgtgaaatc atatttgtta tctagttaaa ttcaaacaat taacctcaac 1260 t 1261 //