Dbfetch
ID AM041985; SV 1; linear; genomic RNA; STD; VRL; 1265 BP. XX AC AM041985; XX DT 20-OCT-2005 (Rel. 85, Created) DT 20-OCT-2005 (Rel. 85, Last updated, Version 1) XX DE Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Mu 04.13 DE TGB, isolate 1 XX KW TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1; KW triple gene block protein 2; triple gene block protein 3. XX OS Pepino mosaic virus OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-1265 RA Pagan I.; RT ; RL Submitted (20-JUN-2005) to the INSDC. RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria, RL Madrid, 28040, SPAIN. XX RN [2] RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M., RA Jorda C., Garcia-Arenal F.; RT "Genetic structure of the population of Pepino mosaic virus infecting RT tomato crops in Spain"; RL Unpublished. XX DR MD5; 3fc01f9b5a4dbb35b439f6f95b9d5b66. XX FH Key Location/Qualifiers FH FT source 1..1265 FT /organism="Pepino mosaic virus" FT /host="Lycopersicon esculentum" FT /isolate="1" FT /mol_type="genomic RNA" FT /country="Spain:Murcia" FT /clone="Mu 04.13 TGB" FT /db_xref="taxon:112229" FT CDS 47..751 FT /gene="TGBp1" FT /product="triple gene block protein 1" FT /db_xref="GOA:Q3BLF3" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q3BLF3" FT /protein_id="CAJ14349.1" FT /translation="MERSTLINLLQLHHFEPKLSVEGIIVVHGIAGTGKTTLLRTLFSA FT YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFLEPKLAIFGDPCQC FT TYIERLRVPHYTSFRTHRFGKSTAEILNKLFDLNIVSVKKEDDIVEFFNPFEVDPTEHI FT SASEEEVLDFVSDQVVTTSSEELAGLEFAETTFYCTTLAAAVAENPAKTFISLTRHTHK FT LTIGELNARSNS" FT CDS 732..1103 FT /gene="TGBp2" FT /product="triple gene block protein 2" FT /db_xref="GOA:Q3BLE3" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q3BLE3" FT /protein_id="CAJ14350.1" FT /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL FT PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH FT SCYNTHSATNNTQSLSGHH" FT CDS 955..1209 FT /gene="TGBp3" FT /product="triple gene block protein 3" FT /db_xref="GOA:Q3BLE2" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q3BLE2" FT /protein_id="CAJ14351.1" FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAIIHIQQPTIHNHC FT QVIIDGAAIVITNCENTPEVLKAINFSPWNGLSFPKFEN" XX SQ Sequence 1265 BP; 388 A; 293 C; 207 G; 377 T; 0 other; cctccaaaag caacacattg aggggttaag ttttccccag ttcgaaatgg aaagatcaac 60 tctgattaat ttacttcaat tgcaccactt tgagccaaaa ctcagtgttg aaggaatcat 120 agttgtgcac ggaattgcag gcactgggaa aaccacttta cttaggactt tattttctgc 180 ttaccctagc ttagttatag gttcacctag gccttgctat ttagataaac aaaacaaaat 240 ttcacaagtt tgcttatctt gctttcccaa tacccattgt gatattgtcg atgagtatca 300 tttgctagaa agttttctag aaccaaaact ggctatcttt ggtgacccct gtcaatgcac 360 atacattgag agacttagag tcccacatta cacttccttc agaactcata gatttggaaa 420 gtcaactgct gagattttga acaaactgtt tgaccttaat atagtctcag ttaagaaaga 480 agacgacatc gttgaattct ttaacccttt tgaagttgac cccactgagc atatctctgc 540 ctctgaagaa gaagtcttgg actttgtttc tgaccaagtg gtgaccacta gctcagagga 600 actagcagga cttgagtttg cagaaacaac tttctactgc acaacattgg ccgcagctgt 660 tgctgaaaat cctgctaaga ctttcatctc tctgactaga cacacccaca aactcaccat 720 tggggaacta aatgccaggt ctaactccta gagctgacct cactgacaca tacaaaatca 780 ttgccattgc tttcttgttg tcagcttgca tttacttcca aaatagccac taccaacctg 840 ttgctggaga caacttgcac cgtttgcctt ttggtggcca atatcaagac ggcaccaaaa 900 agatatctta ttttccacaa cagcagtcat actttcattc tggaaacaaa ttaaatgtcc 960 tcatacttat cttcattctc acattgggta ttgtcctcac caataaattt agttttagct 1020 ttagtcgtac tactcaccag cattcttgct ataatacaca ttcagcaacc aacaatacac 1080 aatcattgtc aggtcatcat tgacggtgct gcaatagtca taacaaattg tgagaacaca 1140 ccagaagtgc ttaaagcaat caacttctcc ccttggaacg ggttaagttt tcctaaattt 1200 gaaaattaat attgagtgtt cacaaaatca acttcaataa acaatcatgc ctgacacaac 1260 acctg 1265 //