Dbfetch
ID AM041946; SV 1; linear; genomic RNA; STD; VRL; 1269 BP. XX AC AM041946; XX DT 20-OCT-2005 (Rel. 85, Created) DT 20-OCT-2005 (Rel. 85, Last updated, Version 1) XX DE Pepino mosaic virus TGBp1 gene, TGBp2 gene and TGBp3 gene, clone Am 01.2 DE TGB, isolate 1 XX KW TGBp1 gene; TGBp2 gene; TGBp3 gene; triple gene block protein 1; KW triple gene block protein 2; triple gene block protein 3. XX OS Pepino mosaic virus OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-1269 RA Pagan I.; RT ; RL Submitted (20-JUN-2005) to the INSDC. RL Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria, RL Madrid, 28040, SPAIN. XX RN [2] RA Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M., RA Jorda C., Garcia-Arenal F.; RT "Genetic structure of the population of Pepino mosaic virus infecting RT tomato crops in Spain"; RL Unpublished. XX DR MD5; 06e12573b08deeee94725a0e60c4b8d0. XX FH Key Location/Qualifiers FH FT source 1..1269 FT /organism="Pepino mosaic virus" FT /host="Lycopersicon esculentum" FT /isolate="1" FT /mol_type="genomic RNA" FT /country="Spain:Almeria" FT /clone="Am 01.2 TGB" FT /db_xref="taxon:112229" FT CDS 50..754 FT /gene="TGBp1" FT /product="triple gene block protein 1" FT /db_xref="GOA:Q3BLR1" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q3BLR1" FT /protein_id="CAJ14241.1" FT /translation="MERSTLINLLQLHHFEPKLSVEGIIVVHGIAGTGKTTLLRTLFSA FT YPSLVIGSPRPCYLDKQNKISQVCLSCFPNTHCDIVDEYHLLESFPEPKLAIFGDPCQC FT TYIERLRVPHYTSFRTHRFGKSTAEILNKLFDLNIVSVKKEDDIVEFFNPFEVDPTEHI FT SASEEEVLNFVSDQVVTTSSEELAGLEFAETTFYCTTLAAAVAENPAKTFISLTRHTHK FT LTIGELNARSNS" FT CDS 735..1106 FT /gene="TGBp2" FT /product="triple gene block protein 2" FT /db_xref="GOA:Q8JJH7" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q8JJH7" FT /protein_id="CAJ14242.1" FT /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL FT PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH FT SCYNTHSATNNTQPLSGHH" FT CDS 958..1212 FT /gene="TGBp3" FT /product="triple gene block protein 3" FT /db_xref="GOA:Q8B083" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q8B083" FT /protein_id="CAJ14243.1" FT /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTIHNHC FT QVIIDGAAIVITNCENTPEVLKAINFSPWNGLSFPKFEN" XX SQ Sequence 1269 BP; 388 A; 299 C; 209 G; 373 T; 0 other; agccctccaa aagcaacacg ttgaggggtt aagttttccc cagttcgaaa tggaaagatc 60 aactctgatt aatttacttc aattgcacca cttcgagcca aaactcagtg ttgaaggaat 120 catagttgtg cacggaattg caggcactgg gaaaaccact ttacttagga ctttattttc 180 cgcttaccct agcttagtta taggttcacc taggccttgc tatttagata aacaaaacaa 240 aatttcacaa gtttgcttat cttgctttcc caatacccat tgtgatattg tcgatgagta 300 tcatttgcta gaaagttttc ccgaaccaaa attggctatc tttggtgacc cctgtcaatg 360 cacatacatt gagagactta gagtcccaca ttacacttcc ttcagaactc atagatttgg 420 aaagtcaact gctgagattt tgaacaaact gtttgacctt aatatagtct cagttaagaa 480 agaagacgac atcgttgaat tctttaaccc ttttgaagtt gaccccactg agcatatctc 540 tgcctctgaa gaagaagtct tgaactttgt ttctgaccaa gtggtgacca ctagctcaga 600 ggaactagca ggacttgagt ttgcagaaac aactttctac tgcacaacat tggccgcagc 660 tgttgctgaa aatcctgcta agactttcat ctctctgact agacacaccc acaaactcac 720 cattggggaa ctaaatgcca ggtctaactc ctagagctga cctcactgac acatacaaaa 780 tcattgccat tgctttcttg ttgtcagctt gcatttactt ccaaaatagc cactaccaac 840 ctgttgctgg agacaacttg caccgtttgc cttttggtgg ccaatatcaa gacggcacca 900 aaaagatatc ttattttcca caacagcagt catactttca ttctggaaac aaattgaatg 960 tcctcatact tatcttcatt ctcacattgg gtattgtcct caccaataaa tttagtttta 1020 gctttagtcg tactactcac cagcattctt gctataacac acattcagca accaacaata 1080 cacaaccatt gtcaggtcat cattgacggt gctgcaatag tcataacaaa ttgtgagaac 1140 acaccagaag tgcttaaagc aatcaacttc tccccttgga acgggttaag ttttcctaaa 1200 tttgaaaatt aatattgagt gttcacaaaa atcaacttca ataaacaatc atgcctgaca 1260 caacacctg 1269 //