ID AM040955; SV 1; linear; genomic RNA; STD; VRL; 6279 BP. XX AC AM040955; XX DT 30-MAR-2006 (Rel. 87, Created) DT 08-SEP-2006 (Rel. 89, Last updated, Version 2) XX DE Streptocarpus flower break virus, complete genome XX KW coat protein; movement protein; p124 gene; p15; p31; p55; replicase. XX OS Streptocarpus flower break virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6279 RA Willingmann P.; RT ; RL Submitted (29-JUN-2005) to the INSDC. RL Willingmann P., Phytomedizin, Biozentrum Klein-Flottbeck und Botanisch, RL Ohnhorststrasse 18, Hamburg 22605, GERMANY. XX RN [2] RX DOI; 10.1007/s00705-005-0640-8. RX PUBMED; 16328151. RA Heinze C., Lesemann D.E., Ilmberger N., Willingmann P., Adam G.; RT "The phylogenetic structure of the cluster of tobamovirus species RT serologically related to ribgrass mosaic virus (RMV) and the sequence of RT streptocarpus flower break virus (SFBV)"; RL Arch. Virol. 151(4):763-774(2006). XX DR MD5; 24b46c7d8ccde7776fd9422c352953c6. DR EuropePMC; PMC5282660; 28137291. DR RFAM; RF01072; TMV_UPD-PK3. XX FH Key Location/Qualifiers FH FT source 1..6279 FT /organism="Streptocarpus flower break virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:335187" FT CDS 59..3376 FT /gene="p124" FT /product="putative replicase" FT /db_xref="GOA:Q1XF45" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q1XF45" FT /protein_id="CAJ13996.1" FT /translation="MSHTQSTINTKFVEAGMGRNALVNDLATRAVYDKMASEMQLRARR FT PKINFSKAVNQEQTLLAMNAYPEFEITFVGNQNAVHSLAGGLRALELEYMMTLVPYGHV FT TYDIGGNFASHLFKGRDYVHCCAPNLDIRDVARHTAQQDSIMNYSAKLESQQRVIPKFQ FT LEAFNKYANNPRSVVCNNTFQTCEFEPSAERVYAVALHSIYDIPVDEFGAALLRKNVHK FT CFAAFHFSENLLLEVDSCNLEEIGASFVRNNDNLSFFFHGESTLNYSHSYRNVIKYVCK FT TFFPASNRYVYHKEFMVTRVNTWFCSFTKVDTYVLFRGVYRTDVDSEQFYQSMDEAWEY FT KKSLAMLNSERTILKDSSAVNYWFPKVKDMVIIPLFHGSLASGKTKRTEVMVDRDFVYT FT VLNHIRTYQAKALTYQNVLSFVESIRARVILNGTTARSNWDVDKGNLQALAMTFFLQTK FT LAAAQDELVTAKFRTFDQSVKELLWQRVSDFFGDVFPSVKDKLTAHGLIKISEKELEIK FT VPDLYVSFVDRLVSEYKASEELADLDLTKPLEKAEKFYKALSELSILKDSSEFDVEEFK FT TFCNEKDVDPEVVAKVLVAVAEGQLTLPYEKPTPASVSDALAPKIHEDEEEILLVGNTD FT EFPRLKEIDSVTLPLAGISGTKRGFSPASSFHLLPVEDFRKNMLSVVYTGSLKVQQMKN FT YVDYLSASVSATVSNLSRLLNDTIGMDNDVREKAGVFDVRSGKWLITPTGKLHAWGVVE FT FLDRKKRIVLLDWTCDSVPTCQPDWVRLAVSTDTLIYSDLAKLQNLRGSLRDGEPTEPK FT AKIILVDGVPGCGKTKEILERCDFTKDLILVPGKEASKMIIKRANAGGKNRANQDNVRT FT VDSFLIHMKGTQVKRLFIDEGLMLHTGCVNFLALFSHCEEVLVYGDTHQIPFINRVANF FT PYPSHFAQLQYDSVEKRRVTLRCPADVTHHLNSQYDGKVMCTSSILRSVECEVVRGKAV FT LNPKTKPLSGKIITFTQSDKLELQNKGYGEVDVLDVNTVHEIQGETYEHVSLVRLTPTP FT LEIVSHGSPHVLVALTRHTQSLKYYTVVWDPVVKVISDLGKLSNFILDMYKVEKPVQ" FT CDS 59..4879 FT /transl_except=(pos:3374..3376,aa:OTHER) FT /gene="55" FT /product="putative replicase" FT /note="p55 is translated due to a read through of the p124 FT stop codon" FT /db_xref="GOA:Q1XF44" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q1XF44" FT /protein_id="CAJ13997.1" FT /translation="MSHTQSTINTKFVEAGMGRNALVNDLATRAVYDKMASEMQLRARR FT PKINFSKAVNQEQTLLAMNAYPEFEITFVGNQNAVHSLAGGLRALELEYMMTLVPYGHV FT TYDIGGNFASHLFKGRDYVHCCAPNLDIRDVARHTAQQDSIMNYSAKLESQQRVIPKFQ FT LEAFNKYANNPRSVVCNNTFQTCEFEPSAERVYAVALHSIYDIPVDEFGAALLRKNVHK FT CFAAFHFSENLLLEVDSCNLEEIGASFVRNNDNLSFFFHGESTLNYSHSYRNVIKYVCK FT TFFPASNRYVYHKEFMVTRVNTWFCSFTKVDTYVLFRGVYRTDVDSEQFYQSMDEAWEY FT KKSLAMLNSERTILKDSSAVNYWFPKVKDMVIIPLFHGSLASGKTKRTEVMVDRDFVYT FT VLNHIRTYQAKALTYQNVLSFVESIRARVILNGTTARSNWDVDKGNLQALAMTFFLQTK FT LAAAQDELVTAKFRTFDQSVKELLWQRVSDFFGDVFPSVKDKLTAHGLIKISEKELEIK FT VPDLYVSFVDRLVSEYKASEELADLDLTKPLEKAEKFYKALSELSILKDSSEFDVEEFK FT TFCNEKDVDPEVVAKVLVAVAEGQLTLPYEKPTPASVSDALAPKIHEDEEEILLVGNTD FT EFPRLKEIDSVTLPLAGISGTKRGFSPASSFHLLPVEDFRKNMLSVVYTGSLKVQQMKN FT YVDYLSASVSATVSNLSRLLNDTIGMDNDVREKAGVFDVRSGKWLITPTGKLHAWGVVE FT FLDRKKRIVLLDWTCDSVPTCQPDWVRLAVSTDTLIYSDLAKLQNLRGSLRDGEPTEPK FT AKIILVDGVPGCGKTKEILERCDFTKDLILVPGKEASKMIIKRANAGGKNRANQDNVRT FT VDSFLIHMKGTQVKRLFIDEGLMLHTGCVNFLALFSHCEEVLVYGDTHQIPFINRVANF FT PYPSHFAQLQYDSVEKRRVTLRCPADVTHHLNSQYDGKVMCTSSILRSVECEVVRGKAV FT LNPKTKPLSGKIITFTQSDKLELQNKGYGEVDVLDVNTVHEIQGETYEHVSLVRLTPTP FT LEIVSHGSPHVLVALTRHTQSLKYYTVVWDPVVKVISDLGKLSNFILDMYKVEKPVQXQ FT LQIESVFKGSNLFVPAAKSGDPMDLQFYYDTLLPGNSTILNNFDAVSMVLSDNSLNVRD FT CVIDFSKSVPVPRTVASKEFLVPVLRTAAERPRTPSLLENLVAMIKRNFNAPDLTGVID FT IEQTAGYAAEKFWEAFILPEFSGGTSGMLTTDMVHRWLAKQDEATIGQLANFDYVDLPE FT ISAYKHMIKTQPKQKLDLSIQDEYPALQTIVYHSKQINAIFGPMFSELTRQLLERIDGS FT RFLSYTRKTPSQIEDFFSDLNANEAMDILELDISKYDKSQGEFHCAVEYKIWELLGIDA FT YLEEVWKRGHMRTSLKDYTAGIKTVLWYQRKSGDVTTFIGNTIIIAACLATLVPMDRVI FT KAAFCGDDSIIYLPKGLDLPDIQIGANLMWNFEAKLFRKNYGYFCGRYIIHHDRGAIVY FT YDPLKLISKLGCKHIKDFEHLEEFRISLSDVCSSLSNCAYFGQLNDAIAEVYPTAVNGS FT FAFCCISKFLSDKTLFRRLFLDGNSSF" FT CDS 4860..5726 FT /gene="p31" FT /product="movement protein" FT /db_xref="GOA:Q1XF43" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q1XF43" FT /protein_id="CAJ13998.1" FT /translation="MAIVLSKPKVSEFLNLTKAEEILPKFLTRLKTVAISTRDVVSVKG FT TTDLVDIDLLRDVPVNNWRYVGIVGIVASGEWLLPDNVSGGVAISFVDKRLVDSREAIL FT GTYRAAAVEKRFQFKLIPNYFVSQEDALRRPWQVQVSLKGLKFEEGFSPLTLEFVSVVV FT CANSVVTKGLRERLNNVGDPNVEVSEVVVDEFVDSISASQSLSRARNKYVRGNGKVGNN FT SGGFSKYNRHQPERFAGKAMYNSKNVVRGGTSEPTAILHKRMGGSNSIDESLFSVAESD FT LSDSGCA" FT CDS 5668..6072 FT /gene="p15" FT /product="coat protein" FT /db_xref="GOA:Q1XF42" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q1XF42" FT /protein_id="CAJ13999.1" FT /translation="MMNLCSASLSQIFQTQAARDAVREQFGNTLRSVVTQTTRFPEAGF FT QVYINDAALKPLWENLLKSFDTKNRILETEEETRPSTAEVLNATQRVDDSTTAIRGALQ FT RLSDELNRGSGYMNRTSFETILLWSAATAK" XX SQ Sequence 6279 BP; 1784 A; 1145 C; 1470 G; 1880 T; 0 other; gtatttgttt aacaattaca acatacaaca acaacaacat aacacaacaa acaacaacat 60 gtcacacaca caatcaacaa tcaataccaa gtttgtcgag gccggtatgg gcagaaacgc 120 cctcgtcaac gatcttgcaa cacgagccgt ttatgacaag atggctagtg aaatgcaact 180 acgtgctaga cgcccaaaaa tcaacttctc gaaagcagtg aatcaggaac aaacactgct 240 ggcaatgaat gcatatcccg agtttgagat caccttcgta gggaaccaaa acgcggtcca 300 ctcgcttgcg ggtgggcttc gtgctttgga actcgaatat atgatgacac ttgttcctta 360 cgggcacgtc acctacgaca ttggtggaaa tttcgcatct caccttttta aaggaaggga 420 ttacgtacac tgctgtgcac ctaatctcga tattcgcgat gtcgcaaggc acacagccca 480 acaggactca atcatgaact attctgcaaa gctcgaaagc caacaacgag tgattccaaa 540 gtttcagctg gaagctttca ataagtatgc aaataatcct cgttccgtcg tctgtaacaa 600 cactttccaa acatgtgaat tcgagccttc tgctgagcgt gtatacgcag ttgcactcca 660 cagtatatac gatattcctg tcgatgagtt cggtgcagcc ttactcagaa agaatgtgca 720 taaatgcttc gcagccttcc acttttcgga gaatcttctc ctggaagtcg atagttgcaa 780 tctagaggaa atcggcgctt cttttgtccg caacaacgat aatttgtcct ttttctttca 840 tggtgagagt actcttaatt attcgcattc gtatagaaat gttattaagt acgtgtgtaa 900 aacctttttt cccgcatcta atagatatgt ttatcataag gagtttatgg ttactcgtgt 960 taatacgtgg ttctgtagtt ttactaaggt tgatacttat gtgcttttcc gcggtgttta 1020 tagaacagat gttgattccg aacaatttta tcaatcgatg gacgaagcct gggagtacaa 1080 gaagagttta gcaatgctaa atagtgagcg aaccattctg aaagacagct cagctgtcaa 1140 ttattggttt ccaaaggtga aggatatggt catcatacct cttttccatg gttctttagc 1200 atctggaaag acgaaacgaa cagaggtcat ggtagacagg gactttgttt atactgttct 1260 taatcacata aggacatatc aagcgaaggc tctgacttac caaaatgttt tatcctttgt 1320 cgagtctatt cgggctcgtg tgattctcaa tggaacaact gccaggtcga actgggacgt 1380 tgataaagga aacctccaag cacttgctat gacttttttc ttgcaaacta aattggcagc 1440 tgctcaagat gaactggtta cggcgaagtt tagaacattt gatcaatcgg tgaaagaatt 1500 actgtggcag cgtgtttcag attttttcgg ggatgttttt ccctctgtga aggacaaact 1560 tacggcacat gggttgatta agatctcaga aaaggaactt gaaatcaaag ttccagattt 1620 gtacgtcagc tttgtggaca gattagtttc tgagtacaaa gcttctgaag aattagcgga 1680 tttggatctg acaaaaccgc tcgaaaaagc tgaaaaattt tacaaggcac tatctgagtt 1740 gtccattctt aaggactcta gcgaatttga tgttgaagag ttcaaaactt tttgcaacga 1800 gaaagacgtt gacccggaag tggtagcgaa ggttttggtg gctgtggcgg aaggtcaact 1860 gactcttccg tatgagaaac caacacctgc aagtgtgtct gatgcacttg ctccgaagat 1920 acatgaagat gaagaagaaa ttctcctcgt agggaacacg gatgagttcc ccaggctcaa 1980 agagatcgat tcggttactc tcccgcttgc cgggatatct ggaactaaac ggggtttttc 2040 accggcgtca tcctttcatt tgttacccgt ggaagatttt aggaagaata tgttatcagt 2100 cgtgtacact ggttcgctga aagttcaaca aatgaagaac tatgttgatt acttatcagc 2160 ctccgtgtcg gccactgttt ctaatctctc taggttgtta aacgacacaa ttggtatgga 2220 caacgatgtc agggaaaagg ctggtgtttt tgatgtccgt tcgggtaaat ggttgattac 2280 tccgacaggg aaattacatg cttggggtgt ggttgagttt ttggatagaa agaagagaat 2340 tgttctactt gattggactt gtgattctgt tcctacatgt caacctgatt gggtccgact 2400 cgctgtttca acggacacgt tgatatactc ggacttagca aaacttcaaa atttgcgagg 2460 gagcttacgt gatggagaac cgactgaacc gaaagcaaaa ataattctgg ttgatggtgt 2520 gcctggttgt gggaaaacaa aggagatctt agagaggtgc gacttcacaa aggacttgat 2580 tctcgtccct ggtaaggaag cttcaaagat gataatcaaa cgtgcaaatg ctggggggaa 2640 aaatcgtgcg aatcaagata atgtaaggac ggtcgattcc ttccttatac atatgaaggg 2700 gacgcaagtt aagaggcttt tcatcgatga aggtctgatg cttcacactg gttgcgtgaa 2760 tttcttagca cttttttcac attgtgaaga ggttttagtg tacggtgaca cacatcaaat 2820 cccgttcatt aacagagttg cgaattttcc gtatccatca catttcgcgc aactacagta 2880 cgattcggta gaaaagagaa gagtgacgtt gaggtgtcca gcagatgtaa cgcatcattt 2940 gaacagtcaa tacgacggga aagtaatgtg tactagttca attcttaggt ctgtagaatg 3000 tgaagtagtt agaggtaaag ctgtgttaaa tccaaaaacc aaaccccttt cagggaagat 3060 aattactttt acgcagtccg ataagttaga gttacaaaat aagggttacg gtgaggtaga 3120 tgttttagac gtaaatactg ttcatgaaat tcaaggagag acatatgagc atgtttcctt 3180 ggttaggctt acgcctacac cgttggagat tgtctcacat ggatctcctc acgttcttgt 3240 tgctttaact agacatacgc agagtttaaa gtactatact gttgtttggg atcctgtcgt 3300 taaggtcatt tcagatttag gtaaattatc aaactttatt ttagatatgt ataaagtcga 3360 aaaacctgtc caatagcaat tacagataga gagtgtcttc aagggttcga atttattcgt 3420 tccagcagca aagagtggag atcctatgga tcttcaattt tactatgata ctctcttacc 3480 tggtaatagt actattttga ataattttga tgctgtttct atggttctta gtgataatag 3540 tttgaatgtt agagattgtg ttatagattt ttctaagtcg gttccggtgc ctcgaactgt 3600 tgcttcgaag gaattcttag ttcctgtttt gaggacagct gcagaaagac ccagaacacc 3660 gagtcttctt gagaacttgg tcgcgatgat taaaaggaac ttcaatgccc cggatctgac 3720 gggtgtcatt gacattgaac aaacagcggg ttacgccgca gaaaagtttt gggaagcatt 3780 tatacttccg gagttttcag gtgggacttc aggaatgttg acaacggaca tggtacacag 3840 gtggttggca aagcaagacg aggcgacaat aggacaattg gccaactttg actatgtaga 3900 tttgccagaa attagtgctt acaagcacat gattaagact caacccaaac aaaagttgga 3960 tttaagtatc caagatgagt atcctgcgct gcaaacgatt gtttatcatt ctaagcaaat 4020 caacgcaatt ttcggtccga tgttttcaga gttaactaga cagttgcttg agagaattga 4080 tgggagtaga tttttgtctt atacaagaaa aactccgtct caaattgaag atttcttttc 4140 tgatctcaat gcgaatgaag ccatggacat tttagagctc gatatatcca aatatgacaa 4200 atcacaaggt gaatttcatt gcgcggtcga gtacaaaatt tgggagctct tgggaatcga 4260 cgcgtacttg gaagaagtgt ggaagcgagg acacatgaga acatcgctca aagattacac 4320 tgcaggaatc aagaccgttt tgtggtatca gaggaagagc ggtgatgtaa cgacattcat 4380 tggaaacacg ataatcatag cagcttgttt agcaactttg gtaccaatgg atagagtgat 4440 taaagctgca ttttgtggag acgacagtat catatatttg cccaaaggat tggacttacc 4500 tgatatacag attggggcaa atttgatgtg gaatttcgaa gccaaattgt ttagaaaaaa 4560 ctatggttat ttctgtggta ggtatattat acatcatgat aggggtgcta ttgtatatta 4620 tgatccttta aagttaatat ctaaattagg ttgtaaacat attaaggatt tcgagcattt 4680 agaggagttt cgtatttctt tgagtgatgt ttgctcgtct ttgagtaact gtgcttattt 4740 tggtcagttg aatgatgcaa ttgctgaggt atatcctacc gcagtaaatg ggtcgtttgc 4800 tttttgttgt atttctaagt ttttgtctga taagactttg tttcgtcgtt tgtttttaga 4860 tggcaatagt tctttctaag ccaaaggtga gtgagttcct taaccttaca aaggccgagg 4920 aaattcttcc gaagttttta actagattga agactgttgc catttctacg agagacgtag 4980 tttccgttaa gggaacaacg gatctagtgg atatagatct cttacgtgat gttcccgtaa 5040 ataattggcg ttacgttggt attgtgggta ttgttgcgtc cggagagtgg ttgttaccgg 5100 acaatgtttc tggtggtgta gctattagtt ttgttgataa gcgtcttgtt gattctcgtg 5160 aggctatact aggtacgtat agagcggcgg cggtcgagaa acggttccaa tttaaattaa 5220 ttcctaatta ctttgtgtcc caagaggatg ctcttaggag accctggcaa gtccaggttt 5280 cgttaaaggg attaaaattc gaagaagggt tctcaccgct tacgcttgag tttgtttctg 5340 ttgtcgtttg tgctaatagt gtggttacta agggtttgcg tgaaaggctt aataatgtgg 5400 gagatccaaa tgttgaagtt tcagaagttg tcgttgatga gttcgtggac tcgatttccg 5460 cttcacagtc gttaagccgt gctcgtaata aatacgttcg tggtaatggt aaggttggga 5520 ataatagtgg tggttttagt aagtataatc gtcatcagcc ggagaggttc gccggcaagg 5580 ctatgtataa ttctaaaaat gtcgtacgtg gtggtacttc cgaaccaact gcaattcttc 5640 acaaacgcat gggcggatcc aattcaattg atgaatcttt gttcagcgtc gctgagtcag 5700 atctttcaga ctcaggctgc gcgtgatgca gtgcgtgagc agtttggcaa cactctcagg 5760 agtgttgtca cacagacaac gaggttccca gaagcagggt tccaagtgta cataaatgac 5820 gcggcactga agccgctttg ggaaaattta cttaagtcct ttgacaccaa gaatagaatt 5880 cttgagacag aggaagagac tcgcccttca acagcagaag tgcttaacgc aacgcagcgt 5940 gttgatgatt caacaactgc aattcgtgga gcactacaga ggctttctga tgagcttaat 6000 agaggttctg gctatatgaa cagaacttct tttgagacta tattgctgtg gtctgctgcc 6060 actgcaaaat agtggtgcat actataatgc atagtgtttt atcctccact taaatcgaag 6120 gatagtgttc ttcctacttg aaggaagttc tgtgggtgaa ctggctacac aaaccggaag 6180 ggatgtgtag ttctacagag tataaaccag ggggtttaag tccctatagt ggtgcatact 6240 ataatgcata gtgcttttcc ctccacttaa atcgcgccc 6279 //