ID   AM040149; SV 1; linear; genomic RNA; STD; VRL; 1581 BP.
XX
AC   AM040149;
XX
DT   18-MAY-2006 (Rel. 87, Created)
DT   18-MAY-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Penicillium stoloniferum virus S mRNA for capsid protein (cp gene)
XX
KW   Capsid protein; cp gene.
XX
OS   Penicillium stoloniferum virus S
OC   Viruses; Riboviria; Partitiviridae; Gammapartitivirus.
XX
RN   [1]
RP   1-1581
RA   Buck K.W.;
RT   ;
RL   Submitted (17-JUN-2005) to the INSDC.
RL   Buck K.W., Biology, Imperial College London, Sir Alexander Fleming
RL   Building, London SW7 2AZ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s11262-005-6868-2.
RX   PUBMED; 16604444.
RA   Hacker C.V., Brasier C.M., Buck K.W.;
RT   "Determination of the 5'- and 3'-terminal sequences completes the sequences
RT   of the two double-stranded RNAs of Penicillium stoloniferum virus S";
RL   Virus Genes 32(2):137-138(2006).
XX
DR   MD5; e63f46b01419c8be86e8e673fa9962cf.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1581
FT                   /organism="Penicillium stoloniferum virus S"
FT                   /segment="2"
FT                   /strain="ATCC 14586"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:216371"
FT   CDS             112..1416
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:Q1JTL4"
FT                   /db_xref="UniProtKB/TrEMBL:Q1JTL4"
FT                   /protein_id="CAJ01910.1"
FT                   /translation="MSSIAPTDSVSSSGKRSKPGKRERQQARSAVGSAGGKPASASKAA
FT                   AFAQGGSSDPVPMPGKYPVVFSTGAGEPTRDQEFALPVHKAFPLFGSVSDKYRRNPRYA
FT                   EFRAHSEFTDGVFGTHLAVSSLLRLAQQLVHAHVNMGLPLGDFAPLASSDVRIPSALAS
FT                   XXXQFGEFSSPSIGTRFLLRDYEHAVSRVVFLADQLWTNGNSHHIFARSWLPMSNNDGN
FT                   FKTIVASRLLEFISAGDLSILPTVLEDAVLSGEVPEAWEQVKDLLGDAPGVGQVDRRDR
FT                   FDFLFKSYADVGQFTTAFTTQAASDVLTELGLPWNSPSAGHLNWQYSTKQRFTFLADTW
FT                   AKLSAAYSQFFELSSGLATRQSATGSHAQMVDLTSVEGVTVLKAALALSAPEFSLAACF
FT                   PPSCIFVGGITRRVVVTTSLSVSQRATEFCQMDWR"
XX
SQ   Sequence 1581 BP; 307 A; 408 C; 400 G; 463 T; 3 other;
     cgcaaaattc gtgttttgac tgctgtgtat acggcggggt tttcgtttgt tcgtataaac        60
     tttcgatttt tgcctccttc ttttctctgc caagcctagc aagcagtaga gatgtcttca       120
     attgctccca ctgatagtgt ttcgtcctct ggaaagaggt ccaagccagg aaagcgtgag       180
     cgccagcaag cgcgctcggc cgtcggttct gcgggtggaa aacctgcttc cgcgtccaag       240
     gcagcagcct tcgctcaggg tgggtcttcg gaccccgtcc ctatgcctgg aaagtatcct       300
     gtcgtgtttt cgacaggtgc tggagagcct actcgtgatc aggaattcgc ccttcctgtc       360
     cataaggctt tccctctttt cggttccgtc tctgacaagt atcgtcggaa cccgaggtac       420
     gcggaattcc gtgctcattc ggaattcaca gatggcgtgt tcggcaccca tctcgctgtc       480
     tcctctttac tccgtctggc tcaacagcta gtccatgcgc atgtcaacat gggtctaccc       540
     ctaggtgatt tcgcgcctct agcttcttcg gacgtgagga tcccatctgc tttggcatct       600
     gyggwcarcc agtttggtga gttttcctca cctagtatcg gaacgcgatt tctgcttcgt       660
     gattacgagc atgcagtctc gcgtgttgtg tttctcgccg atcaactctg gacgaatgga       720
     aattcgcacc atatctttgc ccggtcgtgg ttaccgatga gcaacaatga tggaaatttt       780
     aaaaccatag tggcatctcg gctcctagag tttatctctg caggagattt gtccattctc       840
     ccaacggtat tagaagatgc cgtgctctcg ggagaagtcc ctgaggcctg ggaacaagta       900
     aaggacctcc ttggtgacgc accaggtgtg gggcaagtcg atcggcgtga tcgtttcgac       960
     ttcctcttta aatcctatgc ggacgtgggg cagttcacaa ctgccttcac cacccaagcg      1020
     gcaagtgatg tgttaacaga acttggtctt ccttggaata gtccctctgc cggacacctc      1080
     aattggcagt actcgacgaa acagcgattc acatttctcg ctgacacctg ggctaagctg      1140
     tccgcagctt actcccagtt cttcgagctc tcttccgggt tggctacccg acaatcagcg      1200
     actggaagtc acgctcagat ggtggatctc acctctgtag aaggcgttac ggtgttgaaa      1260
     gcagctttgg ctctttcggc acctgaattc tccctcgctg cgtgtttccc accgagttgt      1320
     atctttgtgg gtggcattac taggcgtgta gtggtaacta cttctcttag tgtgtctcaa      1380
     cgcgcgactg aattctgcca gatggattgg cgttaagttt gtctcttaga tcagtttttg      1440
     aatttgtgct ttgtctttta acgtgtaaat cggttaagtg ttaacttccg tggcgtggcc      1500
     ccgtttcgtt cttgagtgta tctcatttta cgagtggtgg aactcccgtg aataactggg      1560
     aatgtgaaac agtaaatctc t                                                1581
//