ID   AJ969410; SV 1; linear; genomic RNA; STD; VRL; 2360 BP.
XX
AC   AJ969410;
XX
DT   12-MAY-2005 (Rel. 83, Created)
DT   17-AUG-2007 (Rel. 92, Last updated, Version 2)
XX
DE   Maize stripe virus segment 3, complete sequence, genomic RNA
XX
KW   p3 gene; pc3 gene; capsid protein.
XX
OS   Tenuivirus zeae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2360
RA   Peterschmitt M.;
RT   ;
RL   Submitted (06-MAY-2005) to the INSDC.
RL   Peterschmitt M., Umr Bgpi, Cirad, TA 41/K, Campus International de
RL   Baillarguet, 34398 Montpellier Cedex 5, FRANCE.
XX
RN   [2]
RX   DOI; 10.1007/s00705-007-0981-6.
RX   PUBMED; 17520322.
RA   Mahmoud A., Royer M., Granier M., Ammar E.D., Peterschmitt M.;
RT   "High genetic identity between RNA 3 segments of an Old World isolate and a
RT   New World isolate of Maize stripe virus";
RL   Arch. Virol. 152(8):1583-1586(2007).
XX
DR   MD5; 375f42fb78dc76d014fd00e4ec417424.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2360
FT                   /organism="Tenuivirus zeae"
FT                   /segment="3"
FT                   /host="maize"
FT                   /mol_type="genomic RNA"
FT                   /country="France:Reunion"
FT                   /db_xref="taxon:3052767"
FT   CDS             67..660
FT                   /transl_table=1
FT                   /gene="p3"
FT                   /product="hypothetical protein"
FT                   /db_xref="InterPro:IPR007974"
FT                   /db_xref="UniProtKB/TrEMBL:Q50HQ9"
FT                   /protein_id="CAI94650.1"
FT                   /translation="MNFYTSSVGVRQYDHSLLVLNDLTNIHITCEDVHCSAKLLCYIYD
FT                   IYKSRYPSMDEHSFLRLLKGPDDAEILSTFLRTIIWILSHDRDFPDEFRIPATALASVY
FT                   IKYYSELKPRAPTTNCWTCRMSKNNLPFQVPSIKGFPAEAELYIVPISDHDGKTIEFSG
FT                   MKTLYKSPSKKKHNYVISSDMPPLSARYTVWDGK"
FT   CDS             complement(1317..2267)
FT                   /transl_table=1
FT                   /gene="pc3"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:Q50HQ8"
FT                   /db_xref="InterPro:IPR008864"
FT                   /db_xref="InterPro:IPR009522"
FT                   /db_xref="UniProtKB/TrEMBL:Q50HQ8"
FT                   /protein_id="CAI94651.1"
FT                   /translation="MATNKPANLNDLQKAINDISKDALKYLTDNKASVTTFHDQIGYAG
FT                   YDAATLIGILKDKGGATLAQDVVKMIVMRYVRGTGFVKDVTKKTKATAGSEEAAALVAR
FT                   YGLVSSVGSNANAITLGRVAQLFPNVSYEVTKQFTGLKMAIDSSDLSMSGTDSLLWDFV
FT                   PQYITLDSSSAPYCTTKSVNHILFSIHVIHAFLVTKKTMPETKKKERGLLKDIDMIKYT
FT                   TGLLVITCQSKNLNEAKKKSGRTKVCEPYYVNEKFKESFLALLASFGKNVVCSYGTQVK
FT                   QFLAEQCSLMKTIVDNSSKTQDEMKALIIEFFEEE"
XX
SQ   Sequence 2360 BP; 713 A; 484 C; 392 G; 771 T; 0 other;
     acacaaagtc ctgggtaaaa aatattattt tttatcaata tatatattac ttctgtccat        60
     cgaagcatga acttttacac atcatctgtt ggagtgcgac aatacgacca ctctttattg       120
     gtcttgaatg atctcaccaa cattcatatc acttgtgagg atgtccactg ctctgcaaag       180
     ctcctctgct acatatatga tatctacaag tctaggtacc catcaatgga tgagcattct       240
     ttcttgcgct tgctaaaagg tccagatgat gctgagatac ttagcacctt tttgagaaca       300
     atcatttgga tactgtctca tgacagagac ttcccagatg agttcaggat tccagctaca       360
     gcacttgctt cagtttatat aaaatattac tctgaattga aaccaagagc tcctaccacc       420
     aattgttgga catgcagaat gtccaaaaac aatctacctt tccaagtccc ctcaataaag       480
     ggattccctg ctgaagcaga gctatatata gttccaatct ctgatcatga tggaaagaca       540
     atagagtttt caggaatgaa aacactgtac aagtctccaa gcaagaagaa acacaattat       600
     gtcatttcat cagatatgcc cccacttagt gctagataca ctgtctggga tggcaaatag       660
     agtagtatct gtagaatccc ctttctagga gtgtacggat aatgtaacta agttacattt       720
     taagaataaa aaagtgtgct aagcacacta tccgaatagc aatcggatga aggccttaac       780
     ctaatttttt gtttttttgc ttttttgttt tttatttgtt tttttgtttt ttcatttttt       840
     tggttttttt aatatattat aagattttga gcactctaaa agctcaattt attatacaca       900
     ctatatgtac atatcaataa tagtgaacta aaaagcacaa gcactaaaat ataatagaag       960
     caaaagcaaa gcataataaa catcataaac tataataaga taatattgtt aaaccataat      1020
     aataatgaca cacaaacact caatactaat attatcatac tctcattcat acttgttttt      1080
     gattttccat tttcccattt ttttgttttt ttgtataatc taatttttat ggttttcttg      1140
     atttttttga tttttttgtt tttttgttta aaacacacaa tacaataata taacacaaac      1200
     aacacactta aatagaatat catgacacaa tgtgagcact tcccctgctc agtgccagac      1260
     cgtcttatcc aacgcattct tccactttat gatgatatca tcatagtatg aggaactcac      1320
     tcctcctcga agaactcaat gatcaatgcc ttcatctcat cctgagtctt tgagctgttg      1380
     tctacaatgg ttttcatcaa gctgcactgt tctgccaaaa attgcttgac ctgagtacca      1440
     taggagcaga caacattctt tccgaatgat gcaagcaagg ccaagaatga ctccttgaat      1500
     ttctcattaa catagtatgg ctcacatact ttggtcctcc cagatttctt cttcgcttcg      1560
     ttgaggtttt tggattgaca ggtgatgacc agcaaaccag tggtatactt tatcatgtct      1620
     atgtctttga gcaatcctct ctccttcttt tttgtctctg gcattgtttt cttagtgacc      1680
     aagaaagcat gaatcacatg aatgctgaaa agaatgtggt tgacactctt agttgtgcag      1740
     tatggtgcag atgagctgtc aagtgtaata tattggggaa caaagtccca cagcagggaa      1800
     tcagtcccag acatgctaag atcagatgaa tcaatagcca ttttcagacc agtgaactgt      1860
     ttggtcacct cataggatac atttggaaag agttgagcta cccttcccag tgtaatagca      1920
     tttgcgttgc tacccacaga tgaaactaat ccatagcggg caaccaatgc cgctgcttcc      1980
     tcactgccag cagttgcctt ggttttctta gtgacatcct taacaaagcc agtccctcgg      2040
     acatacctca tcacaatcat cttgacaaca tcttgagcaa gagttgcccc acccttgtct      2100
     ttgagaatac caatcaaagt agccgcatca tagcctgcat accctatctg atcatgaaag      2160
     gtggtcacag acgccttgtt atcagtgaga tacttcaaag catctttgga gatatcattg      2220
     atagctttct ggagatcatt aagatttgca ggcttattag tggccatttt cttcaagggt      2280
     attggtgcaa tggttatgat ttagaccttt ctttagttga tcaatacgaa atcgattaaa      2340
     cgattaccca gactttgtgt                                                  2360
//