ID   AJ889246; SV 1; linear; genomic RNA; STD; VRL; 1800 BP.
XX
AC   AJ889246;
XX
DT   21-MAR-2007 (Rel. 91, Created)
DT   21-MAR-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Potato virus S ORF3 gene, ORF4 gene, ORF5 gene and ORF6 gene, genomic RNA,
DE   isolate Hangzhou
XX
KW   coat protein; nucleic acid binding protein; ORF3 gene; ORF4 gene;
KW   ORF5 gene; ORF6 gene; TGBp2.
XX
OS   Potato virus S
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1800
RA   Adams M.J.;
RT   ;
RL   Submitted (08-MAR-2005) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RA   Shi Y.H., Hong X.Y., Chen J., Adams M.J., Zheng H.Y., Lin L., Qing B.X.,
RA   Chen J.;
RT   "Detection of Potato virus S in China";
RL   Unpublished.
XX
DR   MD5; 1217f49de9833ab129c3c816b7d16a70.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1800
FT                   /organism="Potato virus S"
FT                   /host="Solanum tuberosum (potato)"
FT                   /isolate="Hangzhou"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zhejiang: Hangzhou"
FT                   /db_xref="taxon:12169"
FT   CDS             1..327
FT                   /gene="ORF3"
FT                   /product="TGBp2"
FT                   /db_xref="GOA:A4F357"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:A4F357"
FT                   /protein_id="CAI65414.1"
FT                   /translation="MPLTPPPNYTGLYIAAALGVSLAAVVALFTRSTLPIVGDSQHNLP
FT                   HGGRYRDGTKAIDYFKPAKLNSVEPGNHWYAQPWLLVLLLVALICLSGRHAPCCPRCNR
FT                   VHSA"
FT   CDS             291..491
FT                   /gene="ORF4"
FT                   /product="TGBp2"
FT                   /db_xref="GOA:A4F356"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:A4F356"
FT                   /protein_id="CAI65415.1"
FT                   /translation="MLSKVQPSAQCLMVFILAFALGWYVLRPGNTSCVLLITGESVRLV
FT                   NCELTRDLVEAVATLGPLKHL"
FT   CDS             533..1417
FT                   /gene="ORF5"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A4F354"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:A4F354"
FT                   /protein_id="CAI65416.1"
FT                   /translation="MPPKPDPTSSGETPQAIPLAPPPRHVEEHKVGPNQGPGQNEEAML
FT                   EQRLIRLIELMASKRHNSTLSNISFEIGRPSLEPTPEMRRNPENPYSRFSIDELFKMEI
FT                   RSVSNNMANTEQMAQITADIAGLGVPTEHVAGVILKVVIMCASVSSSVYLDPAGTVEFP
FT                   TGAVPLDSIIAIMKNRAGLRKVCRLYAPVVWNYMLVQNRPPSDWQAMGFQWNARFAAFD
FT                   TFDYVTNGAAIQPVEGLIRRPTPEETIAHNAHKSMAIDKSNRNERLANTNVEYTGGMLG
FT                   AEIVRNHRNAINQ"
FT   CDS             1414..1698
FT                   /gene="ORF6"
FT                   /product="nucleic acid binding protein"
FT                   /db_xref="GOA:A4F355"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:A4F355"
FT                   /protein_id="CAI65417.1"
FT                   /translation="MKADRLAMLLLCVYRPGYTLPVEVCVNIISLSAGPVSGGRSTYAR
FT                   KRRARSIGRCWRCYRVYPPICNSKCDNRTCRPGISQNYKVVTFIRGWSN"
XX
SQ   Sequence 1800 BP; 478 A; 423 C; 467 G; 432 T; 0 other;
     atgccactta ccccgccgcc taactacaca gggttataca ttgcagcagc tttaggagtg        60
     tcccttgccg ccgtagtagc gctattcact aggagtacac tgccaattgt tggggattcg       120
     cagcacaacc tcccacacgg gggacggtat cgcgacggca ctaaagctat tgattacttc       180
     aagcccgcga aactgaattc tgttgagcct ggaaatcact ggtacgccca accttggctg       240
     ctagttctac ttctagttgc gctcatctgc ttatcagggc gtcatgctcc atgctgtcca       300
     aggtgcaacc gagtgcacag tgcttaatgg tttttatctt ggcattcgcg ctaggttggt       360
     atgtgctcag gccaggaaat acaagctgcg ttctgctcat cactggggaa tcagtccggc       420
     tagtcaattg cgagctcaca agagatttag tggaagccgt agcaacattg gggccgttga       480
     agcaccttta ggttcacagg taagagttcg aataaactgt cccacagaga aaatgccgcc       540
     caaaccggat ccgacgagct caggagagac accacaagcg ataccgcttg cgccgccgcc       600
     ccggcacgta gaggagcata aagttggccc aaatcaaggg ccagggcaga atgaagaggc       660
     tatgctggag caaaggctca tcaggttgat tgaactcatg gcctcgaaga ggcacaattc       720
     aacattgagc aacatctctt ttgagatagg taggccctcg cttgagccga cccctgaaat       780
     gcggaggaat ccggagaatc catactcgcg gttttcaatc gatgagcttt tcaagatgga       840
     aatccggtcc gtgtccaaca acatggcgaa caccgagcaa atggcacaaa tcactgctga       900
     catcgctgga ctcggggtcc ccactgaaca cgttgcaggg gttatactga aagtggtgat       960
     catgtgtgca agcgtaagta gctctgttta tctagatcca gcggggactg tagagttccc      1020
     aacaggcgca gtgcccttgg actcgatcat tgcaattatg aagaatcgcg cgggtttgag      1080
     gaaagtgtgc aggctgtatg ctccagtcgt gtggaattac atgctagtcc agaataggcc      1140
     accttcggat tggcaggcca tgggattcca atggaatgca cgcttcgccg catttgacac      1200
     attcgactat gtgactaatg gggctgcaat ccagcccgta gaggggctca tacgcaggcc      1260
     cacacctgag gagacaatag cccacaatgc ccacaagagt atggcaattg acaagtcgaa      1320
     cagaaatgag cgattggcca acactaatgt tgagtacact ggagggatgc ttggcgctga      1380
     gattgtgcgc aatcaccgta acgcgatcaa ccaatgaagg cagaccgttt agccatgtta      1440
     ttattgtgtg tctatcgacc gggatatact ttgccagttg aagtttgtgt aaatataata      1500
     agcctaagtg caggtccagt ttctgggggt cgttccactt acgctcgtaa gcggagggcc      1560
     cgcagcattg ggcgatgctg gcgatgttat cgtgtctatc cacctatttg taattctaag      1620
     tgtgataata gaacatgccg tccaggcatt agtcaaaatt ataaggtagt gactttcatt      1680
     cggggttgga gtaactgagg tgataccacc catggtgcaa agtcagagtt tcgcataaaa      1740
     cttaaataat atataagtgt gcaactataa aaaaaatatg tttttaaaat attttagcat      1800
//