ID   AJ888445; SV 1; circular; genomic DNA; STD; VRL; 1361 BP.
XX
AC   AJ888445;
XX
DT   28-JUN-2005 (Rel. 84, Created)
DT   28-JUN-2005 (Rel. 84, Last updated, Version 1)
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DE   Tomato yellow leaf curl China virus associated DNA 1 rep gene for
DE   replication-associated protein, isolate Y87
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KW   rep gene; replication-associated protein.
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OS   Tomato yellow leaf curl China alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite.
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RN   [1]
RP   1-1361
RA   Zhou X.;
RT   ;
RL   Submitted (28-FEB-2005) to the INSDC.
RL   Zhou X., Zhejiang University, Huajiachi, Institute of Biotechnology,
RL   Kaixuan Road 268, Hangzhou, Zhejiang, 310029, CHINA.
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RN   [2]
RA   Zhou X.;
RT   "Genomic variation of nanovirus-like DNA molecules associated with their
RT   begomovirus-satellite complexes";
RL   Unpublished.
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DR   MD5; ca20ce07d28fe24ad94ce9583edca43f.
DR   EuropePMC; PMC2922188; 20678232.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1361
FT                   /organism="Tomato yellow leaf curl China alphasatellite"
FT                   /isolate="Y87"
FT                   /mol_type="genomic DNA"
FT                   /country="China:Yunnan"
FT                   /isolation_source="tobacco"
FT                   /db_xref="taxon:240557"
FT   CDS             84..1031
FT                   /gene="rep"
FT                   /product="replication-associated protein"
FT                   /function="initiation of rolling circle replication"
FT                   /db_xref="GOA:Q4LBB4"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q4LBB4"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAI59916.1"
FT                   /translation="MPSVTSVFRCFTVFFTSATTPDLVSVFENTHVSYACWQEEESPTT
FT                   KRRHLQGYLQLKGKRTLNQVKSIFGDLKPHLEKQRARKTDEACDYCMKEETRVSGPFEF
FT                   GDYCPSGSHRRRQRESVIRSPVRMSEENPSVFRRVKAKIAEEEFQATVAEIQISNLKSW
FT                   QLRLRTLLDRAPDDRTIFWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSGDNVSYQYIG
FT                   CLGHNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLVNCIHVVVMSNFLPDF
FT                   EKISSDRVHVIPCIPCGACVKHHINEIKCNEYLD"
XX
SQ   Sequence 1361 BP; 407 A; 235 C; 313 G; 406 T; 0 other;
     acccagcctc ggcacccgct ccttggaacc ctcgtgctat ccgcgtgctc tctctcttct        60
     gtaatcctta aaagaaaaaa attatgcctt cggtcacgtc agtgtttcgg tgtttcaccg       120
     tcttcttcac ctctgctact acgcccgatc tcgtttctgt gtttgagaac acccacgtta       180
     gttacgcttg ctggcaggag gaggaatctc cgacgaccaa gcgtcgtcac ttgcagggat       240
     atcttcaatt gaagggtaaa aggaccctga atcaggtgaa atcgatattt ggggatttga       300
     aaccccatct ggagaaacag cgagctcgta agacagacga agcttgcgac tattgtatga       360
     aagaggaaac tagggtttcc ggtccctttg aatttgggga ttattgccct agtgggtctc       420
     atagacgccg gcaaagggaa agtgtaattc ggagtccggt aaggatgtct gaagaaaatc       480
     cgtcagtatt ccggcgagta aaggcaaaga ttgcagagga agaattccag gctactgtag       540
     ctgaaattca aatttcaaat ttgaaatctt ggcaactacg cttgaggacg ctcctcgaca       600
     gggccccaga tgaccgcact atcttctggg tttatggtcc cactggtggt gaaggcaaat       660
     caacgtttgc cagagatctg tatagaagtg ggtcttggtt ttatacacgt ggcggttctg       720
     gggataatgt tagttatcag tatattggtt gtttagggca taatattgta tttgatattc       780
     ctcgtgataa gaaggattat ctgcaatata gtttaattga gatgtttaag gatagattaa       840
     ttgttagtaa caagtacgaa ccgttaatgg ctccacttgt taattgtatt catgttgtag       900
     ttatgtctaa ttttcttcct gattttgaga agattagtag tgatagggtc catgtaattc       960
     cttgtattcc gtgtggtgct tgtgttaagc atcacattaa tgaaataaaa tgcaacgagt      1020
     atttggatta aatacgagta taaatatacg tatattttgc ttctttaaaa aaagaaggaa      1080
     tgaaatgaaa aaaataataa caaacttgca gacatataat tatataaaga agaaaggccc      1140
     cgcaggggca ttgtttggtt acttgttaaa aaaataaata aaagaaaaag gaaaaaagaa      1200
     ataaaaaggt tttaataaaa cgacatcgtt ttggtatgtc tgacttggtc aaattaaatg      1260
     agggactaaa agtgtaaata actgggttct taggtccttc ttttgcaatt tctagggtcc      1320
     ctaggatata aataacacgt caccgaggct ggtgtagtat t                          1361
//