Dbfetch

Dbfetch

ID   AJ885144; SV 1; linear; mRNA; STD; VRL; 720 BP.
XX
AC   AJ885144;
XX
DT   23-JUN-2005 (Rel. 84, Created)
DT   23-JUN-2005 (Rel. 84, Last updated, Version 1)
XX
DE   Rice yellow mottle virus mRNA for coat protein (ORF4 gene), isolate Ma180
XX
KW   coat protein; cp gene; ORF4.
XX
OS   Rice yellow mottle virus
OC   Viruses; Riboviria; Solemoviridae; Sobemovirus.
XX
RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (17-FEB-2005) to the INSDC.
RL   Fargette D., Dgpc, Ird, BP64501, 34394 Montpellier cedex 5, FRANCE.
XX
RN   [2]
RX   DOI; 10.1111/j.1365-294X.2005.02578.x.
RX   PUBMED; 15910330.
RA   Traore O., Sorho F., Pinel A., Abubakar Z.;
RT   "Processes of diversification and dispersion of rice yellow mottle virus
RT   inferred from large-scale and high-resolution phylogeographical studies";
RL   Mol. Ecol. 14(7):2097-2110(0).
XX
RN   [3]
RX   DOI; 10.1111/j.1365-294X.2005.02578.x.
RX   PUBMED; 15910330.
RA   Traore O., Sorho F., Pinel A., Abubakar Z., Banwo O., Maley J., Hebrard E.,
RA   Winter S., Sere Y., Konate G., Fargette D.;
RT   "Processes of diversification and dispersion of rice yellow mottle virus
RT   inferred from large-scale and high-resolution phylogeographical studies";
RL   Mol. Ecol. 14(7):2097-2110(2005).
XX
DR   MD5; 7e3929eae159a907ed10dcbbe35c568a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..720
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Ma180"
FT                   /mol_type="mRNA"
FT                   /country="Mali"
FT                   /db_xref="taxon:31744"
FT   CDS             1..720
FT                   /product="coat protein"
FT                   /note="ORF4"
FT                   /db_xref="GOA:Q9DGY6"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q9DGY6"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAI59691.1"
FT                   /translation="MARKGKKTNSNQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRISG
FT                   TVPGPLSSNTWPLHSVEFLADFKRSATSADATTYDCVPFNLPRVWSLARCYSMWKPTRW
FT                   DVVYLPEVSAAAAGSIEMCFLYDYADTIPSDTGKMSRTAGFVTSSVWYGAEGCHLLSGG
FT                   SARNAVVASMDCSRVGWKRVTSSIPSKTDPNVVNTILPARLAVRSSIKPTVDDTPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 156 A; 198 C; 213 G; 153 T; 0 other;
     atggccagga agggcaagaa aaccaactcc aaccaggggc agcaaggaaa gaagaagagc        60
     cggcgtccac gtgggcgttc ggcggagccc cagcttcaac gggctccagt ggctcaggcc       120
     tcccggatat ctgggacggt tcctggtcca ctatcttcta acacctggcc gctccactcc       180
     gtggaattcc tggcggattt taagcggagt gccacctcag cagacgcgac gacatacgat       240
     tgtgtgccgt tcaatctgcc tcgagtgtgg agtcttgcgc gttgttactc catgtggaag       300
     ccaacacggt gggatgtcgt ttacctccct gaggtgagcg cggcggcagc tggaagtatc       360
     gagatgtgtt ttctctacga ctatgctgac accatcccaa gtgacacggg caagatgagc       420
     aggacggcgg gcttcgtcac ctccagcgtt tggtacggcg cggagggctg ccacttactg       480
     agtggcggct cagcacgaaa tgccgtggtc gcctcgatgg attgttcccg agtcggctgg       540
     aaacgtgtta ctagttccat tcctagtaaa acggatccca acgtcgtaaa caccatactg       600
     ccagctaggc tagctgtgcg gtcgtcgatc aaaccgacgg ttgatgatac gccggggaaa       660
     ctctacgcta ttgtcagtat ggtcctgcgg gatccggttg atccaacact caatacgtga       720
//