ID   AJ878088; SV 1; circular; genomic RNA; STD; VRL; 399 BP.
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AC   AJ878088;
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DT   24-MAY-2005 (Rel. 83, Created)
DT   24-MAY-2005 (Rel. 83, Last updated, Version 1)
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DE   Chrysanthemum chlorotic mottle viroid, clone CM296 VR
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KW   complete genome; hammerhead ribozyme minus; hammerhead ribozyme plus;
KW   RZ+ gene; RZ- gene.
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OS   Chrysanthemum chlorotic mottle viroid
OC   Viruses; Riboviria; Avsunviroidae; Pelamoviroid.
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RN   [1]
RP   1-399
RA   Flores R.;
RT   ;
RL   Submitted (24-JAN-2005) to the INSDC.
RL   Flores R., Biologia del Estres, Inst. Biol. Mol. y Cel. de Plantas, Avda.
RL   de los Naranjos S/N, Valencia, 46022, SPAIN.
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RN   [2]
RA   Gago S., de la Pena M., Flores R.;
RT   "A kissing-loop interaction in a hammerhead viroid RNA critical for its in
RT   vitro folding and in vivo viability";
RL   Unpublished.
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DR   MD5; ceeb0ba63bcc20cf1044c59e67716789.
DR   RFAM; RF00008; Hammerhead_3.
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FH   Key             Location/Qualifiers
FH
FT   source          1..399
FT                   /organism="Chrysanthemum chlorotic mottle viroid"
FT                   /host="Chrysanthemum grandiflora"
FT                   /lab_host="Chrysanthemum grandiflora cultivar Velvet Ridge"
FT                   /mol_type="genomic RNA"
FT                   /clone="CM296 VR"
FT                   /db_xref="taxon:68402"
FT   misc_feature    join(399..399,1..1)
FT                   /gene="RZ+"
FT                   /note="RZ+ self-cleavage site"
FT   misc_RNA        join(392..399,1..53)
FT                   /gene="RZ+"
FT                   /product="hammerhead ribozyme plus"
FT   misc_RNA        complement(51..135)
FT                   /gene="RZ-"
FT                   /product="hammerhead ribozyme minus"
FT   misc_feature    complement(126..127)
FT                   /gene="RZ-"
FT                   /note="RZ- self-cleavage site"
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SQ   Sequence 399 BP; 84 A; 111 C; 113 G; 91 T; 0 other;
     ggcacctgac gtcggtgtcc tgatgaagat ccatgacagg atcgaaacct cttccagttt        60
     cggcttgtgc gggagtaaag ctttcgctct ctccacagcc tcatcaggaa acccacttca       120
     ggtctcgact ggaaggtcgt taaacttccc ctctaagcgg agtagaggta aatacctccg       180
     tcccaccccg ggatgaaagg ggtggggacc cggaacagct ctagttccgg tcctttggag       240
     tccatttctc tcgttggaga ttctcctcgg agaagggaga tggggccagt cccagtcggt       300
     tcgctctcgt agtcacagcc gctggggaac ctaggcagat ggctggacgg agtcttagtc       360
     cactccaaag gaccatgggt tttagacccc catgaggtc                              399
//