ID   AJ878087; SV 1; circular; genomic RNA; STD; VRL; 399 BP.
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AC   AJ878087;
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DT   24-MAY-2005 (Rel. 83, Created)
DT   24-MAY-2005 (Rel. 83, Last updated, Version 1)
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DE   Chrysanthemum chlorotic mottle viroid, clone CM210
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KW   complete genome; hammerhead ribozyme minus; hammerhead ribozyme plus;
KW   RZ+ gene; RZ- gene.
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OS   Chrysanthemum chlorotic mottle viroid
OC   Viruses; Riboviria; Avsunviroidae; Pelamoviroid.
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RN   [1]
RP   1-399
RA   Flores R.;
RT   ;
RL   Submitted (24-JAN-2005) to the INSDC.
RL   Flores R., Biologia del Estres, Inst. Biol. Mol. y Cel. de Plantas, Avda.
RL   de los Naranjos S/N, Valencia, 46022, SPAIN.
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RN   [2]
RA   Gago S., de la Pena M., Flores R.;
RT   "A kissing-loop interaction in a hammerhead viroid RNA critical for its in
RT   vitro folding and in vivo viability";
RL   Unpublished.
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DR   MD5; 6ae09113868427c133acee1a054c54af.
DR   RFAM; RF00008; Hammerhead_3.
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FH   Key             Location/Qualifiers
FH
FT   source          1..399
FT                   /organism="Chrysanthemum chlorotic mottle viroid"
FT                   /host="Chrysanthemum grandiflora"
FT                   /lab_host="Chrysanthemum grandiflora cultivar Bonnie Jean"
FT                   /mol_type="genomic RNA"
FT                   /clone="CM210"
FT                   /db_xref="taxon:68402"
FT   misc_feature    join(399..399,1..1)
FT                   /gene="RZ+"
FT                   /note="RZ+ self-cleavage site"
FT   misc_RNA        join(392..399,1..53)
FT                   /gene="RZ+"
FT                   /product="hammerhead ribozyme plus"
FT   misc_RNA        complement(51..135)
FT                   /gene="RZ-"
FT                   /product="hammerhead ribozyme minus"
FT   misc_feature    complement(126..127)
FT                   /gene="RZ-"
FT                   /note="RZ- self-cleavage site"
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SQ   Sequence 399 BP; 87 A; 109 C; 112 G; 91 T; 0 other;
     ggcacctgac gtcggtgtcc tgatgaagat ccatgacagg atcgaaacct cttccagttt        60
     cggcttgtgc gggagtaaag ctttcgctct ctccacagcc tcatcaggaa acccacttca       120
     ggtctcgact ggaaggtcgt taaacttccc ctctaagcgg agtagaggta aatacctccg       180
     tccaaccccg ggaggaaagg ggttgggacc cggaacagtt ccagttccgg tcctttggag       240
     tccatttctc tcgttggaaa ttctcctcgg agaagggaga tggggccagt cccagttggt       300
     tcgctctcgt agtcacagcc actggggaac ctaggcagat ggctggacgg agtcttagtc       360
     cactccagag gaccttgggt ttgaaacccc caagaggtc                              399
//