ID   AJ878086; SV 1; circular; genomic RNA; STD; VRL; 398 BP.
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AC   AJ878086;
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DT   24-MAY-2005 (Rel. 83, Created)
DT   24-MAY-2005 (Rel. 83, Last updated, Version 1)
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DE   Chrysanthemum chlorotic mottle viroid, clone CM1
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KW   complete genome; hammerhead ribozyme minus; hammerhead ribozyme plus;
KW   RZ+ gene; RZ- gene.
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OS   Chrysanthemum chlorotic mottle viroid
OC   Viruses; Riboviria; Avsunviroidae; Pelamoviroid.
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RN   [1]
RP   1-398
RA   Flores R.;
RT   ;
RL   Submitted (24-JAN-2005) to the INSDC.
RL   Flores R., Biologia del Estres, Inst. Biol. Mol. y Cel. de Plantas, Avda.
RL   de los Naranjos S/N, Valencia, 46022, SPAIN.
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RN   [2]
RA   Gago S., de la Pena M., Flores R.;
RT   "A kissing-loop interaction in a hammerhead viroid RNA critical for its in
RT   vitro folding and in vivo viability";
RL   Unpublished.
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DR   MD5; 842fffe1b246526a46fa1be0f82790c3.
DR   RFAM; RF00008; Hammerhead_3.
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FH   Key             Location/Qualifiers
FH
FT   source          1..398
FT                   /organism="Chrysanthemum chlorotic mottle viroid"
FT                   /host="Chrysanthemum grandiflora"
FT                   /lab_host="Chrysanthemum grandiflora cultivar Bonnie Jean"
FT                   /mol_type="genomic RNA"
FT                   /clone="CM1"
FT                   /db_xref="taxon:68402"
FT   misc_feature    join(398..398,1..1)
FT                   /gene="RZ+"
FT                   /note="RZ+ self-cleavage site"
FT   misc_RNA        join(391..398,1..53)
FT                   /gene="RZ+"
FT                   /product="hammerhead ribozyme plus"
FT   misc_RNA        complement(51..135)
FT                   /gene="RZ-"
FT                   /product="hammerhead ribozyme minus"
FT   misc_feature    complement(126..127)
FT                   /gene="RZ-"
FT                   /note="RZ- self-cleavage site"
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SQ   Sequence 398 BP; 87 A; 108 C; 111 G; 92 T; 0 other;
     ggcacttgac gtcggtgtcc tgatgaagat ccaagacagg atcgaaacct cttccagttt        60
     cggcttgtgt gggagtaaag ctttcgctct ctccacagcc tcatcaggaa acccacttca       120
     ggtctcgact ggaaggtcgt aaacttcccc tctaagcgga gtagaggtaa atacctccgt       180
     cccaccccgg gaggaaaggg gtggggaccc ggaatagatc caattccggt cctttggagt       240
     ccatttctct cgttggattt tctcctcgga gaagggagat ggggccagtc ccagtcggtt       300
     cgctctcgta gtcacagcca ctggggaacc taggcagatg gctggacgga gtcttagtcc       360
     actccagagg accttgggtt tataaccccc aagaggtc                               398
//