ID AJ875159; SV 1; circular; genomic DNA; STD; VRL; 2761 BP. XX AC AJ875159; XX DT 13-JAN-2006 (Rel. 86, Created) DT 17-MAR-2006 (Rel. 87, Last updated, Version 2) XX DE Tomato leaf curl Joydebpur virus segment DNA-A, complete sequence XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein; KW replication protein; replication enhancer; KW transcriptional activator protein. XX OS Tomato leaf curl Joydebpur virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2761 RA Maruthi M.N.; RT ; RL Submitted (13-JAN-2005) to the INSDC. RL Maruthi M.N., Natural Resources Institute, University of Greenwich, Central RL Avenue, Chatham Maritime, Kent, ME4 4TB, UNITED KINGDOM. XX RN [2] RX AGRICOLA; IND43787821. RX DOI; 10.1111/j.1365-3059.2005.01275.x. RA Maruthi M.N., Rekha A.R., Alam S.N., Kader K.A., Cork A., Colvin J.; RT "A novel begomovirus with distinct genomic and phenotypic features infects RT tomato in Bangladesh"; RL Plant Pathol. 55(2):290-290(2006). XX DR MD5; 4b6601dfd000713aecf92a3505485015. DR EuropePMC; PMC2170441; 17963488. XX FH Key Location/Qualifiers FH FT source 1..2761 FT /organism="Tomato leaf curl Joydebpur virus" FT /segment="DNA-A" FT /host="tomato" FT /mol_type="genomic DNA" FT /country="Bangladesh:Gazipur, Joydebpur" FT /db_xref="taxon:309390" FT CDS 146..502 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2PBZ7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2PBZ7" FT /protein_id="CAI44695.1" FT /translation="MWDPLVNDFPETVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ISVIRARNYGEATGRYNHFHARLEGTPPSQLRQPIFQPCCCPHCPRHQSKSMGEQAHEQ FT EAQDVQDVQKPRCS" FT CDS 306..1076 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q2PBZ6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2PBZ6" FT /protein_id="CAI44696.1" FT /translation="MAKRPADIIISTPASKVRRRLNFDSPYSSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMFRSPDVPRGCEGPCKVQSFESRHDVQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1073..1477) FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:Q2PBZ5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2PBZ5" FT /protein_id="CAI44697.1" FT /translation="MDSRTGEPITAAQAENGVFIWEITNPLYFKITEHHHRPFLMNHDI FT ITVQVQFNHNLRKALGIHKCFLTFRIWTTLQPRTGHFLRVFRTQVLQFLNNFAVISINN FT VIRAVDHVLWNVLAQTIYVQSSSIIKFNIY" FT CDS complement(1218..1622) FT /gene="AC2" FT /product="transcriptional activator protein (TrAP)" FT /db_xref="GOA:Q2PBZ4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2PBZ4" FT /protein_id="CAI44698.1" FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKRGTRRRRVDLDCGCSYFIALR FT CHDYGFTHRGTHHCSSGREWRVYLGDNKSPLFQDNRAPPPAIPNEPRHHHSPSTVQSQP FT EESVGDTQMFSNLPNLDDLTASDWSFLKGL" FT CDS complement(1525..2610) FT /gene="AC1" FT /gene_synonym="AC4" FT /product="replication protein" FT /db_xref="GOA:Q2PBZ3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2PBZ3" FT /protein_id="CAI44699.1" FT /translation="MAPPNKFRINAKNYFLTYPKCSLTKEEALSQLQHLETPVNKLFIR FT VCRELHENGEPHLHVLLQFEGKFQCKNHRFFDLVSPSRSAHFHPNIQGAKSSTDVKAYV FT EKDGDFIDFGVFQIDGRSARGGQQSANDAYAEAINSWSKAAALNILREKAPKDYVLQFH FT NLNANLDRIFTPPPEVYVSPFSSSSFDQVPEELEEWATENVVSAAARPLRPVSVVIQGD FT SRTGKTVWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEFLDEEKNSALKNWALKNATFITLEGPL FT YSGSNQSPAQASQEGDQASSR" FT CDS complement(2160..2453) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="GOA:Q2PBZ2" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2PBZ2" FT /protein_id="CAI44700.1" FT /translation="MGNLIYTCSSNLRENSNAKITDSSTSFPHPGQHISIRTFRELRAL FT QMSKPTWRKTETSLILEFSRSMADQLEEVSNLPTTHMPRQSIHGPKLRPSIF" XX SQ Sequence 2761 BP; 738 A; 572 C; 651 G; 800 T; 0 other; accggatggc cgcgattttt ttcaagtggg ccccaccacg cacgtgctga caaggacaat 60 tggaccaatc agaaatgccg ctcaaagctt aattgtttcg tggtccccta tataaacttg 120 ggctccaagt agtgcactca taccaatgtg ggatccgtta gtaaacgact ttcctgaaac 180 cgttcacggt tttaggtgta tgctagccgt taaatatctg cagctagtag aaaagacgta 240 ttctccagat actctcgggt acgatttaat ccgggattta atttcagtta tcagggccag 300 aaattatggc gaagcgaccg gcagatataa tcatttccac gcccgcctcg aaggtacgcc 360 gccgtctcaa cttcgacagc ccatattcca gccgtgctgc tgcccccatt gtccgcgtca 420 ccaaagcaaa agcatgggcg aacaggccca tgaacaggaa gcccaggatg tacaggatgt 480 tcagaagccc agatgttcct agaggctgtg aaggcccatg taaggtccag tcctttgagt 540 ctagacatga tgtccaacac ataggtaaag tcatgtgtgt tagtgatgtt actcgtggaa 600 ctgggctgac ccatcgagtt ggtaaaaggt tttgtgttaa gtccgtctat gtactgggca 660 agatttggat ggatgagaac atcaagacta agaatcacac gaatagtgtt atgtttttcc 720 ttgttagaga tcgtaggccc gtagataagc cccaagactt tggtgaggtg tttaacatgt 780 ttgataatga gcccagtacg gctaccgtga agaacgtgca tcgtgatagg tatcaggtgc 840 tcaggaagtg gcatgcaact gtgactggtg gtcaatatgc atcgaaggag caagctctcg 900 tgaagaagtt tattagggtt aataattatg ttgtgtataa ccagcaagag gctggcaagt 960 atgaaaacca tactgagaat gcattgatgt tgtacatggc gtgtactcat gcctctaacc 1020 ctgtgtatgc tactttgaag atacggatct atttctatga ttccgtaaca aattaataaa 1080 tattgaattt tattatgctt gaactttgta cataaattgt ttgcgctaat acattccata 1140 atacatgatc gactgctcta attacattgt ttatactaat tacagcaaaa ttatttaaaa 1200 actgcaaaac ttgggtccta aagaccctta agaaatgacc agtccgaggc tgtaaggtcg 1260 tccagattcg gaaggttaga aaacatttgt gtatccccaa cgctttcctc aggttgtgat 1320 tgaactgtac ttggactgtg atgatgtcgt ggttcattag gaatggccgg tggtggtgct 1380 cggttatctt gaaatagagg ggatttgtta tctcccagat aaacacgcca ttctcggcct 1440 gagctgcagt gatgggttcc cctgtgcgtg aatccatagt cgtggcagcg taatgcgatg 1500 aagtatgaac agccgcagtc caggtcaacg cgacgacgcc tggtccccct cttggctagc 1560 ctgtgctgga ctttgattgg aacctgagta gagtgggcct tcgagggtga tgaaggtcgc 1620 attcttcaaa gcccaatttt tgagtgcgct atttttctct tcatccaaga actctttata 1680 gctggaattg ggtcctggat tgcagaggaa gatagcggga attccacctt taatttgaac 1740 tggctttccg tattttgtat ttgattgcca gtccctttgg gcccccatga attctttaaa 1800 gtgttttaga taatgaggat caacgtcatc aatgacgttg taccaggcgt cattactgta 1860 cacctttggg ctaaggtcga gatgaccaca caaataattg tgtggaccta gtgacctcgc 1920 ccacaccgtc ttgcccgttc gactatcacc ctgtatgact acacttacgg gtcgtaatgg 1980 ccgcgcagcg gcagacacca cattctcggt agcccattct tcaagttcct cgggaacttg 2040 atcaaaagaa gaggaagaaa aaggagaaac ataaacctcc ggtggaggtg taaaaatcct 2100 atctaaatta gcatttaaat tatgaaactg taaaacataa tctttgggag ctttctccct 2160 taaaatattg agggccgcag ctttggacca tgaattgatt gcctcggcat atgcgtcgtt 2220 ggcagattgc tgacctcctc tagctgatct gccatcgatc tggaaaactc caaaatcaat 2280 gaagtctccg tctttctcca cgtaggcttt gacatctgta gagctcttag ctccctgaat 2340 gttcggatgg aaatgtgctg accgggatgg ggaaacgagg tcgaagaatc ggtgattttt 2400 gcattggaat tttccctcaa attggaggag cacgtgtaga tgaggttccc cattttcgtg 2460 tagttctctg caaaccctaa taaataattt atttactgga gtttctaaat gttgtaattg 2520 ggaaagtgcc tcttctttag taagagagca cttgggatat gtgaggaaat aatttttggc 2580 atttattctg aatttatttg gaggagccat tgacttggtc aatcggtgtc cagcaaactt 2640 ggctatgcaa ttggtgtctg gtgtcttatt tatatgtaga caccgaatgg catatgtgta 2700 atttttgaaa taactttaat tcaaatttca aaatgcccaa agcggccatc cgtctaatat 2760 t 2761 //