ID AJ875157; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC AJ875157; XX DT 13-JAN-2006 (Rel. 86, Created) DT 17-MAR-2006 (Rel. 87, Last updated, Version 2) XX DE Tomato leaf curl New Delhi virus-Severe[Jessore] segment DNA-A, complete DE sequence XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein; KW replication associated protein; replication enhancer protein; KW transcriptional activator protein. XX OS Tomato leaf curl New Delhi virus-Severe[Jessore] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Maruthi M.N.; RT ; RL Submitted (13-JAN-2005) to the INSDC. RL Maruthi M.N., Natural Resources Institute, University of Greenwich, Central RL Avenue, Chatham Maritime, Kent, ME4 4TB, UNITED KINGDOM. XX RN [2] RX DOI; 10.1111/j.1365-3059.2005.01275.x. RX AGRICOLA; IND43787821. RA Maruthi M.N., Rekha A.R., Alam S.N., Kader K.A., Cork A., Colvin J.; RT "A novel begomovirus with distinct genomic and phenotypic features infects RT tomato in Bangladesh"; RL Plant Pathol. 55(2):290-290(2006). XX DR MD5; cc17321fbce8bc0012495fced1259bcb. DR EuropePMC; PMC2170441; 17963488. DR EuropePMC; PMC3125359; 21676270. DR EuropePMC; PMC5127021; 27834936. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Tomato leaf curl New Delhi FT virus-Severe[Jessore]" FT /segment="DNA-A" FT /host="tomato" FT /mol_type="genomic DNA" FT /country="Bangladesh:Jessore" FT /db_xref="taxon:309385" FT CDS 120..458 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q3MPY6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q3MPY6" FT /protein_id="CAI44687.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEIEKNYSPDTVGYDLVRDL FT ILVLRAKNYGEATSRYHHFNARIESTPSSQLRQPLWSSCTCPHCPRHKSKGLDKQADEQ FT KTQNVQNV" FT CDS 280..1050 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q2PC04" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q2PC04" FT /protein_id="CAI44688.1" FT /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARALVPIARVTKAKAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1047..1457) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q2PC03" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2PC03" FT /protein_id="CAI44689.1" FT /translation="MITDSRTGEYITADRAESGVYTWEIRNPLYFKILKHHSRPFLREH FT DIIKIQIQFNHNLRKALGLHKCFLTFQIWTGLRPQIGIFLRVFKTQVLKYLDMLGVIGI FT YNVIRAVYHVLDNVLEQTIDVQTSYDIKLDIY" FT CDS complement(1177..1596) FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:Q2PC02" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2PC02" FT /protein_id="CAI44690.1" FT /translation="MQSSSHSRNHSIPVAKTSLPQKKKKSIRRRRVDLPCGCSYYVSIN FT CHDHGFTHRGIHHCGSSREWRIYLGNSKSPVFQNFETPQQALPKRARHNQDSNTIQPQP FT AESPGASQVFSNFPNLDGLTPSDWDFLESLQNPGT" FT CDS complement(1499..2584) FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:Q2PC01" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2PC01" FT /protein_id="CAI44691.1" FT /translation="MAPPSRFRINAKNYFLTYPKCSLTKEEALSQLQTLETPTSKKFIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVSPTRSAHFHPNIQGAKSASDVKAYI FT DKDGDILEWGVFQIDGRSARGGQQTANDAYAQAINTGNKEDAMKVLKELAPKDYVLQFH FT NLITNLDRIFQPRSEVYVSPFSISSFDRVPPELVDWVTSNVVCAAARPFRPISVVIEGD FT SRTGKTMWARCLGTHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWAIKNAVFITLEEPL FT YSGRENIAPPEEEEEHSQEAS" FT CDS complement(2251..2427) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="GOA:Q2PC00" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2PC00" FT /protein_id="CAI44692.1" FT /translation="MGLRISMFSSNSKENSNAKITDSSTWCPQLGQHISIRTFRELNQH FT RTSKHTSTKTETF" XX SQ Sequence 2740 BP; 749 A; 596 C; 605 G; 790 T; 0 other; accgaatggc cgcgcaaatt tttatgtggg accccgacca atgaaattcg acctacatga 60 cttctttaat gcatggggtc ctttaaatag acttgctcac caagtttgga tccacaaaca 120 tgtgggatcc attattgcac gaatttccag aaagcgttca tggtctaagg tgcatgctag 180 ctgtaaaata tctccaagag atagaaaaga actattcccc agacacagtc ggctacgatc 240 ttgtccgaga tctcattctt gttctccgag caaagaacta tggcgaagcg accagcagat 300 atcatcattt caacgcccgc atcgaaagta cgccgtcgtc tcaacttcga cagcccctat 360 ggagctcgtg cacttgtccc cattgcccgc gtcacaaaag caaaggcctg gacaaacagg 420 ccgatgaaca gaaaacccag aatgtacaga atgtatagaa gtcccgacgt gccaagggga 480 tgtgaaggcc cttgcaaggt gcagtccttc gaatccaggc acgatgtctc tcatattggc 540 aaagtcatgt gcgttagtga tgttacccga ggaactggac tcacacatcg cgtaggaaag 600 cgattttgtg tgaaatcagt ttatgtgctg gggaagatat ggatggatga aaacatcaag 660 acgaaaaacc atactaacag tgttatgttt tttttggtcc gtgaccgtcg tcctacaggg 720 tccccccaag attttgggga agtttttaac atgtttgaca acgaaccgag cacagcaacg 780 gtgaagaaca tgcatcgtga tcgttatcaa gtgttacgga agtggcatgc gactgtgacg 840 ggaggaacat atgcatctag ggagcaagca ttagttagga agtttgttag ggttaataat 900 tatgtcgtgt acaatcaaca agaggccggc aagtatgaga atcatactga aaacgcatta 960 atgttgtata tggcctgtac tcacgcatca aatcctgtat atgctacttt gaaaatccgg 1020 atctatttct atgattcggt aacaaattaa taaatatcaa gctttatatc atatgaagtc 1080 tgtacatcaa tcgtctgttc caatacatta tccaatacat gatacacagc tcttattaca 1140 ttatatattc ctatgacacc taacatatcc aggtacttaa gtacctgggt tttgaagact 1200 ctcaagaaaa tcccaatctg agggcgtaag cccgtccaga tttggaaagt tagaaaacac 1260 ttgtgaagcc ccagggcttt ccgcaggttg tggttgaatt gtatttgaat cttgattatg 1320 tcgtgctctc ttaggaaggg cctgctgtgg tgtttcaaaa ttttgaaata caggggattt 1380 cgaatttccc aggtatatac gccactctct gctcgatccg cagtgatgta ttcccctgtg 1440 cgtgaatccg tgatcatggc agttgatcga cacgtaataa gaacaaccac acggaagatc 1500 aactcgcctc ctgcgaatgc tcttcttctt cttctggggg agcgatgttt tcgcgaccgg 1560 aatagagtgg ttcctcgagt gtgatgaaga ctgcattctt gattgcccac tgcttcagtg 1620 ctgcattctt ctcttcgtcc agatattcct tatagctgct gttcggacct ttattgcaca 1680 ggaagatagt gggaattcca cctttaatca tgactggctt tccgtatttc gtgttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaagtgctt tagatagtgg ggatcaacgt 1800 catcaatgac gttgtaccag gcatcattgc tatacacctt tgggctgaga tctagatgtc 1860 cacacaagta attgtgtgtt cctaaacaac gagcccacat tgttttgccc gtcctactat 1920 ccccctctat gactacactt attggcctaa aaggccgcgc agcggcacac acaacgttgg 1980 acgtgaccca atcgacgagt tctggcggaa ctctgtcgaa ggaagaaatt gaaaatggag 2040 agacataaac ctcagatcga ggttgaaaaa tgcgatctaa atttgtaatc aaattgtgaa 2100 actgcagaac ataatccttt ggtgcaagtt cttttaatac tttcatcgca tcttctttat 2160 ttcctgtatt aatcgcctga gcatatgcat cgtttgccgt ttgctgacca ccacgagcag 2220 atcgtccatc gatctgaaaa acaccccatt ctagaatgtc tccgtctttg tcgatgtatg 2280 ctttgacgtc cgatgctgat ttagctccct gaatgttcgg atggaaatgt gctgaccgag 2340 ttggggacac caagtcgaag aatctgttat ttttgcattg gaattttcct tcgaattgga 2400 tgagaacatg gatatgcgga gacccatcct cgtgaagctc tcgacagatc ttgatgaatt 2460 tcttcgaagt tggggtttct agggtttgta attgggaaag tgcctcttcc tttgtaagag 2520 agcactttgg atacgtgagg aaatagtttt tcgcatttat tctaaaacga cttggcggag 2580 ccataaaact attcgtttcg atccggtgtc tctcaacttt ctctatgtaa ttggtgtctg 2640 gagtcccata tataggtaag acaccatatg gcagaattgt aattttggaa agaaaattac 2700 tttaattcaa attccctaaa gcggccattc gtataatatt 2740 //