ID AJ875059; SV 1; linear; genomic RNA; STD; VRL; 2489 BP. XX AC AJ875059; XX DT 13-JAN-2005 (Rel. 82, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 3) XX DE Rice stripe virus NS3 gene for putative replication protein and CP gene for DE coat protein, isolate LLi04, genomic RNA, complete virus segment XX KW CP gene; NS3 gene; coat protein; replication protein. XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2489 RA Li F.; RT ; RL Submitted (13-JAN-2005) to the INSDC. RL Li F., Plant pathology, Institute of Plant Virology, Fujian Agriculture and RL Forestry University, Fuzhou,350002, Fujian province, CHINA. XX RN [2] RA Yang J., Li F., Wu Z., Chen H., Xie L.; RT "Genetic diversity of Rice stripe virus in Yunnan"; RL Unpublished. XX DR MD5; 3871de1db7a7cb673d3da02862ffb5e8. XX FH Key Location/Qualifiers FH FT source 1..2489 FT /organism="Tenuivirus oryzaclavatae" FT /segment="RNA3" FT /isolate="LLi04" FT /mol_type="genomic RNA" FT /country="China:Yunnan province, Qujing Luliang" FT /db_xref="taxon:3052763" FT CDS 66..701 FT /gene="NS3" FT /product="putative replication protein" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:Q7TFY7" FT /protein_id="CAI44206.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCEDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEFRLPAIMMSSSY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKKHKYVISSDKPPLSARYVKYVDSSALGPSPGSSPAVL" FT CDS complement(1429..2397) FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q5JZU6" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q5JZU6" FT /protein_id="CAI44207.1" FT /translation="MGTNKPATLADLQKAINDISKDALNYLAAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGSNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLIDKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTK FT LYLAQQSKLMKILAENTSKTATEVSGLVKDFFEDEAEGADD" XX SQ Sequence 2489 BP; 741 A; 534 C; 443 G; 771 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacagttc cgacatcatc 60 taagcatgaa cgtgttcaca tcgtctgtgg gttctgtgga atttgatcat cctctacttt 120 tggagaatga tctgaccagt ttgagcatca actgtgaaga tgtccactgc tcttcaagag 180 ctttatgtta tatatatgac atacattcat ctaggcaccc ctccattgat gagcatcagt 240 ttctgaggct tctccatggt cctgatgatg ctgtcactct aggctctttc ttaaagactc 300 tgatctggat tctgtcccat gataagaacc tcccagaaga gttcagactt cctgctataa 360 tgatgtcatc ctcttatgtg aagttcttca ctgaagtgaa gccacgaccc ccgtcaacaa 420 attgctggac atgcaggatg tctaaggaca atttgccctt taccgttcct agtgtcaagg 480 ggtttcctcc agatgctgag ctttatattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caataggaag actctatata gatcgcctag taagaaaaag cataagtatg 600 tcatttcctc agataagcca cctcttagtg cacgttatgt taagtacgtg gattctagtg 660 cactaggacc atcaccaggc agctctccag ctgtgctgta gaaataaaga aaaaagagaa 720 ggagaattaa aacaaaaacc aaaaaaacac aaaaaatctt aaaataaaaa ataaaataaa 780 acacaaaaac acaaaaaact aaaaactgga aaacattgta atctaaaacc tacacaccac 840 tggccgtcta gtggactcta gctggtagag aaagctatgc ttttgcctaa agccatgatt 900 ggccaatcct taaaatgtgc taagcacatt atccgaggat gtctcggatg tttttttacc 960 taacctaatt tttttgtatt tttatatatt ttttgatttt tttgtttttt atatacatat 1020 ttttgatttt tttgtttttt tgttttttca ttttttattc taatatatat tcttctagtt 1080 actacattta tatatttacc tagtcatata ctctacatat atagtatata tcacaaaata 1140 gagctatgca ataaaactaa tatcactata ctacaagctt acatctgaat atttagatag 1200 acttatcaaa ctaaagactc tattggagag tgagcgataa taatagcaat acatcataca 1260 caaaacctaa aaccacatag ataaaataac ttatgtgata taatttaaaa ctaaaataga 1320 aatgttatat atacatatta acttacactt aaaggaacaa cacactgttt gaagacatgc 1380 gtcttctagg gagatatgag acccccagca actgctgacc agttcagtct agtcatctgc 1440 accttctgcc tcatcctcga agaaatcctt caccaatccg ctgacttcag ttgctgtctt 1500 tgaagtgttc tcagcaagga tcttcatcag cttactctgt tgagccaagt acagcttggt 1560 ctggttccca tatgtactga tcgtgttgac agacatacca gccagtgcat cgaagattgt 1620 ggtcttcact ttcccattgg tgatgaattc atctaagacc ttctttctac catcctcctt 1680 cttcttgtca atcaagttct ttgacttgca tgtgatgacc aggagaccag ttgtgtactt 1740 catcatgtct atgtcctttg tcagaccacg ctccttcttc ttaccctctg gcatggtctt 1800 tttagttatt tggaaggagt gaatgatgtg cacaacaaac aagatgtgac taagggagtg 1860 agttgtgcag taaggagctg tttcactctc cagtttgatg tattgtggaa catagtccca 1920 cagtaggttg tcacatcctg tcagccccag atcagaagag tccacagcca tcttaacacc 1980 agaaatttgt cgcacaactt catgtgagac atttgggaat agctgagcca accttccaag 2040 tgtgatggca ttggcatttg atcccacaga ggacactatc ccataccttg acaccaaggt 2100 tgaagcctca gtgcttccag ccgccacctt cactttcttg gtgacatctc tcacaaagcc 2160 agtgcctctc acatacctca tggtgatgca catagtcata tccttggcca atgtgtcacc 2220 acctttgtcc ttcaatatgc caatcagagt tgcagcatca tagcctgcat actctatctg 2280 accagcaaaa gtcacaacat cagctttatg agcagccagg taattcagcg catcttttga 2340 gatgtcattg attgccttct gcaaatcagc tagagtggct ggcttgttgg tgcccattgt 2400 agcaagaggt actggaggaa tggttgcggc ttagatgaaa tttggagtgt aaaagcaaaa 2460 tcgaaaattt tattacccag actttgtgt 2489 //