ID   AJ871374; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   AJ871374;
XX
DT   24-DEC-2004 (Rel. 82, Created)
DT   19-MAY-2006 (Rel. 87, Last updated, Version 8)
XX
DE   Cymbidium mosaic virus cp gene for coat protein, genomic RNA
XX
KW   coat protein; cp gene.
XX
OS   Cymbidium mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-672
RA   Sherpa A.R.;
RT   ;
RL   Submitted (22-DEC-2004) to the INSDC.
RL   Sherpa A.R., Plant virus Lab, Floriculture Division, Inst of Himalayan
RL   Bioresource Technology, IHBT, Palampur (H.P.) P.B.# 6, India, Himachal
RL   pradesh,, INDIA.
XX
RN   [5]
RX   DOI; 10.1111/j.1439-0434.2006.01093.x.
RX   AGRICOLA; IND43796507.
RA   Sherpa A.R., Hallan V., Pathak P., Zaidi A.A.;
RT   "Characterization of the Coat Protein Gene of Cymbidium mosaic virus
RT   Isolates from India";
RL   J. Phytopathol. 154(5):275-280(2006).
XX
DR   MD5; 83a1f5445c828a01a88950b0318a049e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Cymbidium mosaic virus"
FT                   /host="Orchids"
FT                   /isolate="Orissa"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Orissa"
FT                   /isolation_source="Epidendrum"
FT                   /db_xref="taxon:12178"
FT   CDS             1..672
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q5ND73"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q5ND73"
FT                   /protein_id="CAI39209.1"
FT                   /translation="MGESTPTPAATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEIK
FT                   AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGFCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT                   AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLYALPGPPT
FT                   E"
XX
SQ   Sequence 672 BP; 130 A; 241 C; 161 G; 140 T; 0 other;
     atgggagagt ccacaccaac tccagctgcc acttactccg ctgccgaccc cacttctgca        60
     cccaagttgg ccgacctggc tgccattaag tactcacctg tcacctcctc tatcgccacc       120
     cccgaggaaa tcaaggccat aacccaattg tgggttaaca atcttggcct ccccgccgac       180
     acagtaggta ccgcggccat tgacctggct cgcgcctacg ctgacgtcgg ggcgtccaag       240
     agtgctaccc tgctcggctt ctgccctacg aaacctgatg tccgtcgcgc cgctcttgcc       300
     gcgcagatct tcgtggccaa cgtcactccc cgccagtttt gcgcttacta cgcaaaagtg       360
     gtgtggaatc tgatgctggc tactaacgat ccgcccgcca actgggccaa ggctggtttc       420
     caggaggata cccggtttgc cgcctttgac ttcttcgatg ccgtcgattc cactgccgcg       480
     ctggagcctg ctgaatggca gcgccgccct actgaccgtg aacgtgctgc gcactcgatc       540
     gggaagtacg gcgcccttgc ccgtcagcgt atccaaaacg gcaacctcat caccaacatt       600
     gccgaggtca ccaagggcca tcttggctcc accaacactc tctacgctct gcctggaccc       660
     cctactgaat aa                                                           672
//