ID   AJ867444; SV 1; circular; genomic DNA; STD; VRL; 2800 BP.
XX
AC   AJ867444;
XX
DT   07-DEC-2004 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   East African cassava mosaic Cameroon virus DNA-A
XX
KW   AC1 gene; AC2 gene; AC3 gene; AV1 gene; AV2 gene; coat protein;
KW   precoat protein; relication initiation protein;
KW   replicational enhancer protein; transcriptional activator.
XX
OS   East African cassava mosaic Cameroon virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2800
RA   Winter S.;
RT   ;
RL   Submitted (06-DEC-2004) to the INSDC.
RL   Winter S., Plant Virus Division, DSMZ, c/o BBA, Messeweg 11/12, 38104,
RL   GERMANY.
XX
RN   [2]
RA   Ariyo O.A., Koerbler M., Dixon A.G.O., Atiri G.I., Winter S.;
RT   "Molecular variability and distribution of Cassava mosaic begomoviruses in
RT   Nigeria";
RL   Unpublished.
XX
DR   MD5; c82d15d6b693f723147a2dbefa332ec0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2800
FT                   /organism="East African cassava mosaic Cameroon virus"
FT                   /segment="DNA-A"
FT                   /host="Manihot esculenta"
FT                   /mol_type="genomic DNA"
FT                   /country="Nigeria:Kano"
FT                   /isolation_source="plant"
FT                   /db_xref="taxon:223262"
FT   CDS             173..520
FT                   /gene="AV2"
FT                   /product="precoat protein"
FT                   /db_xref="GOA:Q5L4H3"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:Q5L4H3"
FT                   /protein_id="CAI30102.1"
FT                   /translation="MWNPLVNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL
FT                   IGVLRCKSYGEATRRYNNLNTRIQGAEGAELRQPIHEPCGCPYCPRHQKQNMGQQAHVS
FT                   EAQDVQDVSKP"
FT   CDS             333..1106
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q5L4H2"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q5L4H2"
FT                   /protein_id="CAI30103.1"
FT                   /translation="MAKRPGDIIISTPVSKVRRGLNFDSPYTNRVVAPTVRVTRSKIWA
FT                   NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSEVTRGSGITHR
FT                   VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE
FT                   PTTATVKNDYRDRFQVLRKFHATVVGGPSGMKEQALVKRFFRINNHIVYNHQEQAKYEN
FT                   HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN"
FT   CDS             complement(1103..1507)
FT                   /gene="AC3"
FT                   /product="replicational enhancer protein"
FT                   /db_xref="GOA:Q5L4H1"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q5L4H1"
FT                   /protein_id="CAI30104.1"
FT                   /translation="MDLRTGEDIGALQWRNGAFIWEIPNPLYFTILNHDSMPFNMNRDI
FT                   IDVQIRFNYNLRKALGMHKCFLNFRVWTRLHPQTWRFFKTFRTQVMKYLTNLGVISIST
FT                   VIDAVHHVLNIVFVGTLSVSQDHAIKFNIY"
FT   CDS             complement(1248..1655)
FT                   /gene="AC2"
FT                   /product="transcriptional activator"
FT                   /db_xref="GOA:Q5L4H0"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q5L4H0"
FT                   /protein_id="CAI30105.1"
FT                   /translation="MRSSSPSPSHSSPPPIKARHRQAKIRAPRRRRIDLTCGCSIYRSI
FT                   NCHNHGFTHRGRHWCSSMEEWRLYLGDPKSPIFHNPQPRQHAVQHESRHNRCPDSVQLQ
FT                   PEESTGDAQVFSQLPGLDSFTSSDLAFLQNL"
FT   CDS             complement(1585..2643)
FT                   /gene="AC1"
FT                   /product="relication initiation protein"
FT                   /db_xref="GOA:Q5L4G9"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q5L4G9"
FT                   /protein_id="CAI30106.1"
FT                   /translation="MPRAGRFQINAKNYFITYPRCSLAKEEALSQLKALSYPTNIKFIR
FT                   VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI
FT                   EKGGEFLDDGIFQVDARSARGEGQHLAQVYAEALNASSKSEALQIIKEKDPKSFFLQFH
FT                   NISANADRIFQAPPQTYVSPFLSSSFTHVPEEIEVWVSENICRPAARPWRPISIVLEGD
FT                   SRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVGPHYLKHFKEFMGAQRDW
FT                   QSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKEYLDEDKNSTLKNWAIKNALFISLTEPL
FT                   FSSTDQSQAQAS"
XX
SQ   Sequence 2800 BP; 754 A; 550 C; 717 G; 779 T; 0 other;
     accggatggc cgcgcccgaa aaaagcatgt gggcctcatg atagtccgcg tccgcaaaag        60
     aaagtggtcc ccgcgcacgc atgtttgtcg gccaataaga ttggcgcctt gaatgctaga       120
     tattgagttt tgactttata tacttcgtca cgaagtagtg gagcgcgtca aaatgtggaa       180
     tccgttagtt aacgattttc cggaaaccgt tcacggtttc cgttcgatgc ttgctgttaa       240
     atacctgtta catctggaac aggaatatga tcgcggtact gtcggggcgg agtatatacg       300
     tgatctaata ggggtgctac ggtgtaagag ttatggcgaa gcgaccagga gatataataa       360
     tctcaacacc cgtatccaag gtgcggaggg ggctgaactt cgacagccca tacacgaacc       420
     gtgtggttgc ccctactgtc cgcgtcacca gaagcaaaat atgggccaac aggcccatgt       480
     atcggaagcc caagatgtac aggatgtatc gaagccctga cgtccctaag ggctgtgaag       540
     gcccatgtaa ggttcagtct tatgaacaga gagatgatgt gaagcatact ggtatagtcc       600
     gatgtgtcag tgaagttacg cgtgggtcag gcattaccca tagagttggg aagaggtttt       660
     gtgtgaagtc catatatata ttgggcaaga tctggatgga tgagaatatc aagaagcaaa       720
     atcatacgaa ccatgttatg ttttttctcg ttcgagatag aaggccttat gggccgagtc       780
     ctcaagattt tggacaagtg ttcaacatgt ttgataatga acctacgact gcaactgtga       840
     agaatgatta tagggaccgg tttcaggtgt tacgtaaatt ccatgcgact gtagttggtg       900
     gaccctcagg gatgaaggaa caagctttgg taaagaggtt ttttaggatc aataatcata       960
     tagtgtataa tcatcaggaa caggccaagt atgagaatca taccgagaat gcgttgttat      1020
     tgtatatggc atgtacacat gcctcaaatc ctgtgtacgc tacgcttaaa atacgcatct      1080
     atttctatga tgcagtgaca aattaataaa tattaaattt gattgcatga tcttgggata      1140
     cagatagggt gcccacaaaa acgatattca atacatgatg cactgcatct attacagttg      1200
     aaatcgaaat aacacctaaa ttagtgagat atttcatgac ttgtgtccta aaggttttga      1260
     agaaacgcca agtctgagga tgtaaacgag tccagacccg gaagttgaga aaacacttgt      1320
     gcatccccag tgctttcctc aggttgtagt tgaaccgaat ctggacatct attatgtcgc      1380
     gattcatgtt gaacggcatg ctgtcgtggt tgaggattgt gaaatatagg ggatttggga      1440
     tctcccagat aaaggcgcca ttcctccatt gaagagcacc aatgtcttcc cctgtgcgta      1500
     aatccatggt tgtgacaatt aatgctgcga tagatggaac agccacaagt taggtcgatg      1560
     cgtcgacgtc taggtgctct gattttagct tgcctgtgcc tggctttgat cggtggagga      1620
     gaagagtggc tcggtgaggg agatgaagag cgcattcttg atcgcccaat tcttgagagt      1680
     ggaattcttg tcctcgtcta ggtattcttt ataggacgaa ttgggacccg gattgcataa      1740
     gaagatggtg ggaatcccac ctttaatttg aatgggcttt ccgtattttg tgtttgattg      1800
     ccaatctcgt tgggccccca tgaactcttt gaaatgcttt agataatgcg ggcctacgtc      1860
     gtcaatgacg ttgtaccatg cgtcgtttga atatatcttg ggagacagat ccaggtgtcc      1920
     acatagatag ttatgtgggc ccagagatcg ggcccacatc gtcttcccgg ttcggctatc      1980
     accttcgaga acaatactga tcggtctcca tggccgcgca gcgggacggc atatattttc      2040
     ggatacccat acttctattt cctctgggac gtgcgtaaat gaggatgata agaacggact      2100
     aacgtaagtt tgtggcggag cctggaagat gcgatccgcg ttagcagata tgttatggaa      2160
     ctgtaaaaaa aaggactttg gatccttttc tttgataatt tgaagagctt ctgatttaga      2220
     agaagcattc aacgcttctg catatacctg tgctaaatgc tggccctccc ccctggcact      2280
     tctggcatcg acctggaaaa ttccatcgtc aagaaattcc cctccctttt caatgtaagc      2340
     cttgacatcg gacgatgatt tagctccctg aatgttcgga tggaaatgtg ttgatcggga      2400
     tggggaaatg agatcgaaga atctggggtt ggtacattgg aacttgcctt cgaattggat      2460
     gagaacatgg agatgaggca ccccatcctg atgtagttct ctgcaaaccc taatgaattt      2520
     gatattcgtc gggtaagaaa gggctttcaa ttgggaaagg gcctcttcct ttgctaagga      2580
     gcatcgggga taggttatga aataattttt ggcatttatt tgaaaacgac cggctctcgg      2640
     catatttgct gtcgttttgt atcgggggac actcaaaact ccaggggaac ggtggaatgg      2700
     ggggcattat atatgatgtc ccccaatggc atatgtgtaa ataggtagac ttccattcaa      2760
     aatttgaatt gtgaatattg gcggccatcc gattaatatt                            2800
//