ID AJ865341; SV 1; circular; genomic DNA; STD; VRL; 2765 BP. XX AC AJ865341; XX DT 01-MAR-2005 (Rel. 83, Created) DT 14-JUL-2023 (Rel. 144, Last updated, Version 5) XX DE Tomato leaf curl Comoros virus complete genome, isolate DE Mayote:Dembeni:2003. XX KW AC2; AC1 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; AC4 protein; KW AV2 protein; coat protein; complete genome; replication enhancer protein; KW replication-associated protein; KW transcriptional transactivator protein gene. XX OS Tomato leaf curl Comoros virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RX PUBMED; 15831967. RA Delatte H., Martin D.P., Naze F., Goldbach R., Reynaud B., Peterschmitt M., RA Lett J.M.; RT "South West Indian Ocean islands tomato begomovirus populations represent a RT new major monopartite begomovirus group"; RL J. Gen. Virol. 86(PT 5):1533-1542(2005). XX RN [2] RP 1-2765 RA Delatte H.; RT ; RL Submitted (23-NOV-2004) to the INSDC. RL Delatte H., Virology, CIRAD-3P, 7, chemin de l'IRAT / Ligne Paradis, 97410 RL Saint Pierre, REUNION XX DR MD5; 50a6a61751d7f7930a1f4f0e622de950. DR EuropePMC; PMC2092379; 18052529. DR EuropePMC; PMC3088723; 21573141. DR EuropePMC; PMC3589402; 23472190. DR EuropePMC; PMC6344024; 30673741. XX FH Key Location/Qualifiers FH FT source 1..2765 FT /organism="Tomato leaf curl Comoros virus" FT /host="Lycopersicon esculentum (tomato)" FT /isolate="Mayote:Dembeni:2003" FT /mol_type="genomic DNA" FT /country="Mayotte:Dembeni" FT /db_xref="taxon:997078" FT CDS 136..486 FT /codon_start=1 FT /gene="AV2" FT /product="putative AV2 protein" FT /db_xref="GOA:Q5DVA7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q5DVA7" FT /protein_id="CAI26281.1" FT /translation="MWDPLLNEFPDSVHGFRCMLAIKYLQAIEQTYEPNTLGHELIRDL FT ISVVRARDYVEATRRYNHFHARLEGASETELRQPLYQPCCCPHCPRHKQTSVMDVQAHV FT SKAQDVQNVQKP" FT gene 136..486 FT /gene="AV2" FT CDS 296..1072 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q5DVB2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q5DVB2" FT /protein_id="CAI26282.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYTSRAVVPIVPGTSRRRSW FT TYRPMYRKPRTYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGPGITH FT RVGKRFCVKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGAAPMDFGQVFNMFDN FT EPSTATVKNDLRDRYQVLRKFHATVVGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVGN" FT gene 296..1072 FT /gene="AV1" FT CDS complement(1069..1473) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q5DVB1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q5DVB1" FT /protein_id="CAI26283.1" FT /translation="MDSRTGELITAAQAQSGVFIWEIQNPLYFKIIDHDNRPFNMPHDI FT ISVQIRFNHNLRKELGIHKCFLNFRVWTSLQPQTGLFLSVFRNHVLKYLDRLGVISINN FT VIRAVDHVLYDVILKTLQVDENHEIKFNIY" FT gene complement(1069..1473) FT /gene="AC3" FT CDS complement(1214..1621) FT /codon_start=1 FT /gene="transcriptional transactivator protein" FT /product="AC2" FT /db_xref="GOA:Q5DVB0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q5DVB0" FT /protein_id="CAI26284.1" FT /translation="MQHSSPSTSHSTQLPIKVQHRIAKKKAVRRRRVDLDCGCSYYLHI FT NCIDHGFSHRGTHHCSSSTEWRVYLGDTKSPIFQDYRPRQPAIQHAPRHHISPDKIQPQ FT PEEGTGDSQMFSQLQGLDELTASDWSFLKRI" FT gene complement(1214..1621) FT /gene="transcriptional transactivator protein" FT CDS complement(1530..2609) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q5DVA9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q5DVA9" FT /protein_id="CAI26285.1" FT /translation="MPRAGRFSIKAKNYFLTYPKCSLTKEEALSQIRALQTPVNKLFIK FT ICRELHENGEPHMHALIQFEGKYNSTNQRFFDLTSPSRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNTGSKSEALRVIKELAPKDFVLQFH FT NLNSNLDRIFQEPPAPYVSPFLSSSFTQVPEQLEEWVSENVMDAAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNAPLKAWALKNATFVTLHEPL FT YSTANQSPAQNSQEEGSEA" FT gene complement(1530..2609) FT /gene="AC1" FT CDS complement(2150..2452) FT /codon_start=1 FT /gene="AC4" FT /product="putative AC4 protein" FT /db_xref="GOA:Q5DVA8" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q5DVA8" FT /protein_id="CAI26286.1" FT /translation="MGNLICMPSFNSRENTIVPINDSSTLLPQAGQHISIRTFRELNPA FT PTSSPTSTRTETPSNGENFRSMDDLQGGDNNQPMTLTPQLLTQAVSQRLLESLRN" FT gene complement(2150..2452) FT /gene="AC4" XX SQ Sequence 2765 BP; 699 A; 568 C; 664 G; 834 T; 0 other; accggatggc cgcgcccgaa aaaagaaggt ggtccccgcg cactatcttt tgtcatccaa 60 taagaatcgc gcgtcaaagc ttagataagc gtttttgtcc ttataaactt gctcgccaag 120 tagttgtctc acaaaatgtg ggatccactc ttgaacgagt tcccagactc tgttcacggt 180 tttcgttgta tgctagctat caaatatttg caggccattg agcaaaccta tgagcccaac 240 actttgggcc acgaattgat ccgtgatctc atctccgtcg ttagagctcg tgattatgtc 300 gaagcgaccc gccgatataa tcatttccac gcccgcctcg aaggtgcgtc ggagactgaa 360 cttcgacagc ccttatacca gccgtgctgt tgtccccatt gtcccaggca caagcagacg 420 tcggtcatgg acgtacaggc ccatgtatcg aaagcccagg acgtacagaa tgtacagaag 480 ccctgacgtt ccaaagggtt gtgaaggccc atgtaaggtc cagtcttatg agcagaggga 540 tgatgttaag catactggta ttgttcgttg tgttagtgat gttacgcgtg gtccgggaat 600 tactcatagg gttggcaaga ggttctgtgt taagtccatt tacattttag ggaaaatatg 660 gatggatgaa aatatcaaga agcagaatca cactaatcag gttatgtttt ttttagttcg 720 tgatagaagg ccttacggtg cagccccaat ggattttggg caggtgttta acatgtttga 780 taacgagccc agtacagcta cggtgaagaa tgatttgaga gacaggtacc aggttttgcg 840 gaagtttcat gcaactgttg taggtggtcc ctctgggatg aaggaacagg cgttagttaa 900 gaggtttttt aggattaata gtcatgtaac ttataatcat caggaagcag ctaagtatga 960 gaaccatact gagaatgctt tgttgttgta tatggcatgt actcatgcct ctaatccagt 1020 gtatgctact cttaagatac ggatctactt ctatgattcg gtcggcaatt aataaatatt 1080 aaattttatt tcatgattct cgtcgacttg aagtgtcttt agaattacat cgtataatac 1140 atgatcaact gctctgatta cattattaat tgaaataact cctaatctat ctaaatattt 1200 aagaacgtga ttcctaaata cgcttaagaa aagaccagtc tgaggctgta agctcgtcca 1260 gaccctgaag ttgagaaaac atttgtgaat ccccagttcc ttcctcaggt tgtggttgaa 1320 tcttatctgg actgatatga tgtcgtgggg catgttgaat ggccggttgt cgtggtcgat 1380 aatcttgaaa tataggggat tttgtatctc ccagataaac acgccactct gtgcttgagc 1440 tgcagtgatg agttcccctg tgcgagaatc catgatcgat gcagttgatg tgtagatagt 1500 atgagcagcc gcagtcgaga tcgactcttc tacgcctcac tgccttcttc ttggctattc 1560 tgtgctggac tttgattggc agttgagtag agtggctcgt ggagggtgac gaatgttgca 1620 ttttttaatg cccaggcttt caggggtgca tttttatcct cgtccagata ttctttatat 1680 gaggatgtcg ggcctggatt gcagaggaag atagtgggaa ttccgccttt aatttgaatt 1740 ggcttcccgt actttgtatt gctttgccag tccctttggg cccccatgaa ttctttaaag 1800 tgcttcagat aatgcggatc tacgtcatca atgacgttgt accacgcatc attgctgtac 1860 accttggggc tcaggtcaag atgaccgcac agataattgt gaggtcctaa tgatctggcc 1920 cacattgttt tgccggtacg actatcaccc tcaattacta tactattcgg cctccatggc 1980 cgcgcagcgg catccatgac gttctcggaa acccactctt caagttgttc cggaacttga 2040 gtaaaagaag aagataaaaa aggagaaaca taaggagccg gtggctcctg aaaaatccta 2100 tctaaattac tatttaaatt atgaaattgc aacacaaaat cttttggtgc taattcctta 2160 atgactctaa gagcctctga cttactgcct gtgttaagag ctgcggcgta agcgtcattg 2220 gctgattgtt gtccccccct tgcagatcgt ccatcgatct gaaattctcc ccattcgagg 2280 gtgtctccgt ccttgtcgat gtaggacttg acgtcggagc tggatttagc tccctgaatg 2340 ttcggatgga aatgtgctga cctgcttggg gaagtaaggt cgaagaatcg ttgattggta 2400 ctattgtatt ttccctcgaa ttgaatgagg gcatgcatat gaggttcccc attctcgtgg 2460 agctctctgc agattttgat aaatagctta tttactgggg tttgaagggc tcttatttgg 2520 gaaagtgctt cctctttagt gagagagcat ttgggataag tgaggaaata atttttggct 2580 ttgatgctga aacgaccggc tctcggcatc ttctatgtcg tttatgaatt ggggggcact 2640 caaagtctat ggcaatcggg ggaactgggg ggcaatttat atggtgcccc ccaaatggca 2700 tttctgtaat aatcctcatt gtaatttgaa atttgaagtc cctaagcggc catccgtata 2760 atatt 2765 //