Dbfetch
ID AJ865340; SV 1; circular; genomic DNA; STD; VRL; 2768 BP. XX AC AJ865340; XX DT 01-MAR-2005 (Rel. 83, Created) DT 19-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Tomato leaf curl Mayotte virus complete genome, isolate Kahani XX KW AC1 gene; AC2; AC3 gene; AC4 gene; AC4 protein; AV1 gene; AV2 gene; KW AV2 protein; coat protein; complete genome; replication enhancer protein; KW replication-associated protein; KW transcriptional transactivator protein gene. XX OS Tomato leaf curl Mayotte virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2768 RA Delatte H.; RT ; RL Submitted (23-NOV-2004) to the INSDC. RL Delatte H., Virology, CIRAD-3P, 7, chemin de l'IRAT / Ligne Paradis, 97410 RL Saint Pierre, REUNION. XX RN [2] RX DOI; 10.1099/vir.0.80805-0. RX PUBMED; 15831967. RA Delatte H., Martin D.P., Naze F., Goldbach R., Reynaud B., Peterschmitt M., RA Lett J.M.; RT "South West Indian Ocean islands tomato begomovirus populations represent a RT new major monopartite begomovirus group"; RL J. Gen. Virol. 86(Pt 5):1533-1542(2005). XX DR MD5; 193c10605440474431a6d651be2f7a4b. XX FH Key Location/Qualifiers FH FT source 1..2768 FT /organism="Tomato leaf curl Mayotte virus" FT /host="Lycopersicon esculentum (tomato)" FT /isolate="Kahani" FT /mol_type="genomic DNA" FT /country="Mayotte:Kahani" FT /db_xref="taxon:302100" FT CDS 137..487 FT /gene="AV2" FT /product="putative AV2 protein" FT /db_xref="GOA:Q5DVB8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q5DVB8" FT /protein_id="CAI26275.1" FT /translation="MWDPLLNEFPDSVHGFRCMLAIKYLQAIEQTYEPNTLGHELIRDL FT ICVVRARDYVEATRRYNHFHARLEGSSETELRQPLYQPCCCPHCPRHKQTSVMDVQAHV FT QKAQDVQNVQKP" FT CDS 297..1073 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q5DVB7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q5DVB7" FT /protein_id="CAI26276.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYTSRAVAPIVPGTSRRRSW FT TYRPMYRKPRTYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGAAPMDFGQVFNMFDN FT EPSTATVKNDLRDRYQVLRKFHATVVGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVGN" FT CDS complement(1070..1474) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q5DVB6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q5DVB6" FT /protein_id="CAI26277.1" FT /translation="MDSRTGELITAAQAQSGVFIWEIQNPLYFKIIDHVNRPFNMPHDI FT ISVQIRFNHNLRKELGIHKCFLNFRVWTSLHPQTGLFLRVFRTQVLKYLDRLGVISINS FT VIRAVDHVLYQKIVKTIQVEEKYEIKFNIY" FT CDS complement(1215..1622) FT /gene="transcriptional transactivator protein" FT /product="AC2" FT /db_xref="GOA:Q5DVB5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q5DVB5" FT /protein_id="CAI26278.1" FT /translation="MRPSSPSTSHCTQLPIKVQHRLAKKKAVRRRRIDLDCGCSYYLHI FT NCIHHGFSHRGTHHCSSSTEWRVYLGDTKSPVFQDHRPREPAIQHAPRHHISPDTIQPQ FT PEEGTGDSQMFSQLQGLDEFTPSDWSFLKGI" FT CDS complement(1531..2670) FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q5DVB4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q5DVB4" FT /protein_id="CAI26279.1" FT /translation="MYRYPEKKRELVNRYPLTNMPSAPKKFQINAKNIFLTYPQCTLSK FT EETLSQIQNLSLPSNPKFIKICKELHQNGEPHIHMFIQFEGKIRITNCRLFDLVSPTRS FT VHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNTGSK FT SEALRVIKELAPKDFVLQFHNLNSNLDRIFQEPPAPYISPFLSSSFNQVPEELEEWACE FT NVMDAAARPWRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVID FT DVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKN FT APLRDWAVKNATFITLHEPLYSTANQSPAQISQEEGSEA" FT CDS complement(2151..2582) FT /gene="AC4" FT /product="putative AC4 protein" FT /db_xref="GOA:Q5DVB3" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q5DVB3" FT /protein_id="CAI26280.1" FT /translation="MQKTYSSLIHNALSAKRKHFPKFKTYLFLQTLNSSKSARNSTRMG FT NLTSTCLSSSKGKSASQIADCSTWCPQPGQYISIRTFRELNPAPTSSPTSTRTETPSSG FT ENFRSMEDLQGEGNSQPMTLTPQLLTQAVSQRLLESLRN" XX SQ Sequence 2768 BP; 685 A; 583 C; 659 G; 841 T; 0 other; accggatggc cgcgcgcccg aaaaagcatg tggtccccgc gcactatcgt ttgtcatcca 60 atccgaatcg cgcgtcaaag cttagataat tgtttttgtc tttatatact tcctcgcgaa 120 ggagttatcc cacaaaatgt gggatccact cctaaacgag ttcccagact ctgttcacgg 180 ttttcgttgt atgctagcta tcaaatattt acaggccatc gagcagacgt acgagcccaa 240 tactctgggc cacgaattga tccgtgatct catctgtgtc gttagagccc gtgattatgt 300 cgaagcgacc cgccgatata atcatttcca cgcccgcctc gaaggttcgt cggagactga 360 acttcgacag cccttatacc agccgtgctg ttgcccccat tgtcccaggc acaagcagac 420 gtcggtcatg gacgtacagg cccatgtaca gaaagcccag gacgtacaga atgtacagaa 480 gccctgatgt cccaaagggt tgtgaaggcc catgtaaggt ccagtcgtat gagcagaggg 540 atgatgtgaa gcatactggt attgttcgtt gtgttagtga tgttacgcgt ggttcgggaa 600 ttactcatag ggttgggaag aggttctgtg ttaagtccat ttacatttta gggaagatat 660 ggatggatga aaatatcaag aagcagaatc acactaatca ggttatgttt ttcttagtcc 720 gtgatagaag gccctatggt gcagccccaa tggattttgg acaggtgttt aacatgtttg 780 ataacgagcc cagtacagct acggtgaaga atgatttgag agatagatac caggttttgc 840 ggaagtttca tgcaactgtt gtaggcggtc cctctgggat gaaggaacag gcattagtta 900 agcgattttt taggattaat agtcatgtaa cttataatca tcaggaggca gctaagtatg 960 agaaccatac ggagaatgct ttgttgttgt atatggcatg tactcatgcc tctaacccag 1020 tgtatgctac tcttaagata cggatctact tctacgattc ggtcggcaat taataaatat 1080 taaattttat ttcatatttt tcttcaactt gaattgtttt tacaattttt tgatacaata 1140 catgatcaac tgctctaatt acactgttaa ttgaaataac ccctaatcta tctaaatact 1200 ttagaacttg agtcctaaat acccttaaga aaagaccagt ctgagggtgt aaactcgtcc 1260 agaccctgaa gttgagaaaa catttgtgaa tccccagttc cttcctcagg ttgtggttga 1320 atcgtatctg gactgatatg atgtcgtggg gcatgttgaa tggccggttc acgtggtcga 1380 tgatcttgaa atacagggga ttttgtatct cccagataaa cacgccactc tgtgcttgag 1440 ctgcagtgat gagttcccct gtgcgagaat ccatggtgta tgcagttgat gtggagataa 1500 tatgagcagc cgcagtcgag atctatcctt ctacgcctca ctgccttctt cttggctaat 1560 ctgtgctgga ctttgattgg cagttgagta cagtggctcg tggagggtga tgaaggtcgc 1620 attcttgaca gcccagtctc tcaggggagc gttcttttcc tcgtctagga actctttata 1680 cgaggatgtt ggtcctggat tgcagaggaa gattgtggga atcccgcctt ttatttgaat 1740 tggcttcccg tacttcgtgt tgctttgcca gtccctttgt gcccccatga attctttaaa 1800 gtgtttcagg taatgcggat ctacgtcatc aatgacgttg taccacgcat cattgctgta 1860 cacctttggg ctgaggtcaa gatggccgca taggtaatta tgtggaccca atgatctggc 1920 ccacattgtc ttcccggttc gactatcacc ttcaatcaca atactaatcg gcctccatgg 1980 ccgcgcagcg gcatccatga cgttctcgca cgcccactct tcaagttctt ccggaacttg 2040 attaaaagaa gaagataaaa aaggagaaat ataaggagcc ggtggctcct gaaaaatcct 2100 atctaaatta ctatttaaat tatggaattg caacacaaaa tcctttggtg ctaattcctt 2160 aatgactcta agagcctctg acttactgcc tgtgttaaga gctgcggcgt aagcgtcatt 2220 ggctgactgt tgccctcccc ttgcagatct tccatcgatc tgaaattctc cccactcgag 2280 ggtgtctccg tccttgtcga tgtaggactt gacgtcggag ctggatttag ctccctgaat 2340 gttcggatgg aaatgtactg acctggttgg ggacaccagg tcgaacagtc tgcaatttgt 2400 gatgcggatt ttcccttcga actggataaa catgtggatg tgaggttccc cattctggtg 2460 gagttccttg cagattttga tgaatttagg gtttgaagga agagataggt tttgaatttg 2520 ggaaagtgtt tcctctttgc tgagagtgca ttgtggataa gtgaggaata tgttttttgc 2580 atttatttgg aatttttttg gtgctgaagg catgttggtc aatgggtacc tattgaccag 2640 ctctctcttc ttctctgggt atcggtacat tggtacccat ttatagttgg gtacctaatg 2700 gcatttgtgt aataatcctc attgtgattt gaaatttgaa atcccttagc ggccatccgt 2760 ataatatt 2768 //