ID AJ865339; SV 1; linear; genomic DNA; STD; VRL; 2775 BP. XX AC AJ865339; XX DT 01-MAR-2005 (Rel. 83, Created) DT 20-APR-2011 (Rel. 108, Last updated, Version 5) XX DE Tomato leaf curl Madagascar virus-Androy [Madagascar:Toliary:2001], isolate DE Toliary complete genome XX KW complete genome. XX OS Tomato leaf curl Madagascar virus-Androy [Madagascar:Toliary:2001] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2775 RA Delatte H.; RT ; RL Submitted (23-NOV-2004) to the INSDC. RL Delatte H., Virology, CIRAD-3P, 7, chemin de l'IRAT / Ligne Paradis, 97410 RL Saint Pierre, REUNION. XX RN [2] RX DOI; 10.1099/vir.0.80805-0. RX PUBMED; 15831967. RA Delatte H., Martin D.P., Naze F., Goldbach R., Reynaud B., Peterschmitt M., RA Lett J.M.; RT "South West Indian Ocean islands tomato begomovirus populations represent a RT new major monopartite begomovirus group"; RL J. Gen. Virol. 86(Pt 5):1533-1542(2005). XX DR MD5; 9dd29d5bd5618dd3a31738b578ffa567. XX FH Key Location/Qualifiers FH FT source 1..2775 FT /organism="Tomato leaf curl Madagascar virus-Androy FT [Madagascar:Toliary:2001]" FT /host="Lycopersicon esculentum" FT /isolate="Toliary" FT /mol_type="genomic DNA" FT /country="Madagascar:Toliary" FT /db_xref="taxon:996312" FT CDS 137..487 FT /gene="AV2" FT /product="putative AV2 protein" FT /db_xref="GOA:Q5DVC4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q5DVC4" FT /protein_id="CAI26269.1" FT /translation="MWDPLLNEFPDSVHGFRCMLAVKYLQAVEETYEPNTLGHDLIRDL FT ISVIRARDYVEATRRYNHFHARLEGSSKAELRQPIYQPCCCPHCPRHKQASVMDLPAHV FT PKAQDVQNVQKP" FT CDS 297..1073 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q5DVC3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q5DVC3" FT /protein_id="CAI26270.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVAVPIAPATNRRRSW FT TYRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFEQRDDVKHTGIARCVSDVTRGSGITH FT RVGKRFCIKSIYILGKVWMDENIKKQNHTNNVMFFLVRDRRPSGSAPMDFGQVFNMFDN FT EPSTATVKNDLRDRLQVLRKFHATVVGGPSGMKEQALVKRFYRINNHVVYNHQETAKYE FT NHTENALLLYMACTHYSNPVYATLKIRIYFYDAVTN" FT CDS complement(1070..1474) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q5DVC2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q5DVC2" FT /protein_id="CAI26271.1" FT /translation="MDSRTGELITAPQAQNGVFIWEINNPLYFTITSHEIRPFNMNHDI FT INIQIGFNHNLRKELGIHKCFLNFKVWTTLRPQTGRFLRVFRVQVLKYLNRLGVISINT FT VIRAVDHVLYDVLVNTHQVLEDHEIKFNIY" FT CDS complement(1215..1622) FT /gene="transcriptional transactivator protein" FT /product="AC2" FT /db_xref="GOA:Q5DVC1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q5DVC1" FT /protein_id="CAI26272.1" FT /translation="MRPSSPSTSHCSQVPIKVQHRIAKKRTIRRKRVDLDCGCSYYLHI FT DCSNHGFTHRGTHHCSSGTEWRVYLGDKQSPLFHDHQPRNKAIQHEPRHHQHPDRIQPQ FT PQEGIGDSQMFSQLQGLDDLTASDWSFLKGI" FT CDS complement(1531..2610) FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q5DVC0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q5DVC0" FT /protein_id="CAI26273.1" FT /translation="MPRSGRFSVKAKNYFLTYPNCSLSKEEALAQLQALQTPTNKLFIK FT ICRELHENGEPHLHALIQFEGKYNCTNQRFFDLVSATRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTIEWGEFQIDGRSARGGQQSANDAYAKALNAGSKSEALNVIKQLAPKDFVLQFH FT NLNSNLDRIFQEPPAPYVSPFLSSSFNQVPEELEEWVSENVMDAAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEERNAALKQWAIKNATFVTLHEPL FT FTSANQGPTPYSEEENHTA" FT CDS complement(2151..2453) FT /gene="AC4" FT /product="putative AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q5DVB9" FT /protein_id="CAI26274.1" FT /translation="MGNLICMPSFNSKASTIVPINGSSTWYPQPGQHISIQTFRELNPA FT PTSSPTSIRTETPSNGESFRSTEDLQEEGNNQPMTLTPRRLTQAVSQRLLMSLSN" XX SQ Sequence 2775 BP; 710 A; 568 C; 665 G; 832 T; 0 other; accggatggc cgcgcccctg aaaaagaagt ggtccccgcc actatactat gtcgttcaat 60 gaaattgcgt cctggaaggt tatttattgg gttttgtcct tatatacttg gccgctaagt 120 ttgtgggcct gtcacaatgt gggatccatt gttaaatgag ttccctgact ctgttcatgg 180 ttttcgttgt atgcttgctg taaaatattt gcaggccgtt gaggaaacgt atgagcccaa 240 tactttgggc cacgatttaa ttcgcgatct tatctctgtt attagggctc gtgactatgt 300 cgaagcgacc cggcgatata atcatttcca cgcccgtctc gaaggttcgt cgaaggctga 360 acttcgacag cccatatacc aaccgtgttg ctgtccccat tgcccccgcc acaaacaggc 420 gtcggtcatg gacttaccgg cccatgtacc gaaagcccag gatgtacaga atgtacagaa 480 gccctgatgt ccctaagggt tgtgaaggcc catgtaaggt ccagtcgttt gagcagaggg 540 atgatgtgaa gcatacgggt attgctcgct gtgttagcga tgtgacgcgt ggttcgggta 600 tcactcatag ggttggtaag agattttgta ttaagtccat ttacatttta ggtaaagtat 660 ggatggatga aaatataaag aagcagaatc acacgaacaa cgtgatgttc ttcttggtcc 720 gagatcgaag gcccagtgga tcagcgccca tggactttgg gcaggtgttc aacatgtttg 780 acaatgagcc cagtactgcg actgtgaaga atgatttgcg agataggtta caggttttgc 840 gcaagtttca tgcgaccgtt gttggtggtc cttctgggat gaaggaacag gctttagtta 900 agagatttta taggattaat aatcatgtag tttataatca ccaggaaaca gcgaagtatg 960 aaaatcatac tgagaatgcg ctgttgttgt atatggcttg tactcattat tccaatcccg 1020 tgtacgctac attgaaaata cgcatctatt tctatgatgc agtgacaaat taataaatat 1080 taaattttat ttcatgatcc tccaaaacct ggtgtgtatt tacaagtaca tcgtacaata 1140 catgatcaac tgccctaatt acagtattaa ttgaaataac acctaatcta tttaaatact 1200 tgaggacctg aactctaaat acccttaaga aacgaccagt ctgaggccgt aaggtcgtcc 1260 agaccttgaa gttgagaaaa catttgtgaa tccccaattc cttcctgagg ttgtggttga 1320 atcctatctg gatgttgatg atgtcgtggt tcatgttgaa tggccttatt tcgtggctgg 1380 tgatcgtgaa atagagggga ttgtttatct cccagataaa cacgccattc tgtgcctgag 1440 gagcagtgat gagttcccct gtgcgtgaat ccatggttgg agcagtcgat gtggagatag 1500 tatgagcagc cgcagtctag gtcaacccgt ttacgccgta tggttctctt cttcgctata 1560 cggtgttgga ccttgattgg cacttgtgaa caatggctcg tggagggtga cgaaggtcgc 1620 attcttaatt gcccactgct tgagtgctgc gttcctttcc tcgtccagaa attctttata 1680 ggacgacgtt gggcctggat tgcataggaa gattgtggga attccgcctt taatttgaat 1740 tggcttcccg tactttgtgt tgctttgcca gtccctctgg gctcccataa attccttaaa 1800 gtgctttaaa taatgcgggt ctacgtcatc aatgacgttg taccacgcat cattgctgta 1860 cacctttggg ctaagatcaa gatgtccaca taaataatta tgtggtccca atgatctggc 1920 ccacattgtc tttccggtac gactatcacc ctcgattaca atactattcg gtctccacgg 1980 ccgcgcagcg gcatccatca cgttctcgct cacccactct tcaagttctt ctggaacttg 2040 attaaaagaa gaagataaaa aaggagaaac ataaggagcc ggaggctcct gaaaaatcct 2100 atctaaatta ctatttaaat tatgaaactg taaaacaaaa tctttagggg ctaattgctt 2160 aatgacatta agagcctctg acttactgcc tgcgttaagc gccttggcgt aagcgtcatt 2220 ggctgattgt tgccctcctc ttgcagatct tccgtcgatc tgaaactctc cccattcgat 2280 ggtgtctccg tccttatcga tgtaggactt gacgtcggag ctggatttag ctccctgaat 2340 gtttggatgg aaatgtgctg acctggttgc ggataccagg tcgaagaacc gttgattggt 2400 acaattgtac ttgccttcga attgaatgag ggcatgcaga tgaggttccc cattttcgtg 2460 gagttctctg caaatcttga tgaaaagttt gtttgtggga gtttgtagtg cctgtagttg 2520 agctaaggct tcttctttgg atagtgagca attgggatat gttaagaaat agtttttggc 2580 ttttacactg aaacgaccgg accttggcat tttggaagtc gttttgaatc ggggggcact 2640 caaagtctat ggcaattggg ggaactgggg ggcaattcat atgtgccccc caaatggcat 2700 ttctgtaatt aagggaaagt aaaagtgtaa ttcaaaattt aaaattgaaa ataaagcggc 2760 catccgatta atatt 2775 //