ID AJ865338; SV 1; linear; genomic DNA; STD; VRL; 2777 BP. XX AC AJ865338; XX DT 01-MAR-2005 (Rel. 83, Created) DT 18-MAR-2011 (Rel. 108, Last updated, Version 5) XX DE Tomato leaf curl Madagascar virus-Menabe [Madagascar:Morondova:2001] DE complete genome, isolate Morondova XX KW AC1 gene; AC2; AC3 gene; AC4 gene; AC4 protein; AV1 gene; AV2 gene; KW AV2 protein; coat protein; complete genome; replication enhancer protein; KW replication-associated protein; KW transcriptional transactivator protein gene. XX OS Tomato leaf curl Madagascar virus-Menabe [Madagascar:Morondova:2001] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2777 RA Delatte H.; RT ; RL Submitted (23-NOV-2004) to the INSDC. RL Delatte H., Virology, CIRAD-3P, 7, chemin de l'IRAT / Ligne Paradis, 97410 RL Saint Pierre, REUNION. XX RN [2] RX DOI; 10.1099/vir.0.80805-0. RX PUBMED; 15831967. RA Delatte H., Martin D.P., Naze F., Goldbach R., Reynaud B., Peterschmitt M., RA Lett J.M.; RT "South West Indian Ocean islands tomato begomovirus populations represent a RT new major monopartite begomovirus group"; RL J. Gen. Virol. 86(Pt 5):1533-1542(2005). XX DR MD5; bcd60981622395baac1a43eac22238d7. XX FH Key Location/Qualifiers FH FT source 1..2777 FT /organism="Tomato leaf curl Madagascar virus-Menabe FT [Madagascar:Morondova:2001]" FT /host="Lycopersicon esculentum (tomato)" FT /isolate="Morondova" FT /mol_type="genomic DNA" FT /country="Madagascar:Morondova:2001" FT /db_xref="taxon:996311" FT CDS 137..487 FT /gene="AV2" FT /product="putative AV2 protein" FT /db_xref="GOA:Q5DVD0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q5DVD0" FT /protein_id="CAI26263.1" FT /translation="MWDPLLNEFPDSVHGFRCMLAVKYLQAVEETYEPNTLGHDLIRDL FT ISVIRARDYVEATRRYNHFHARLEGSSKAELRQPIYQPCCCPHCPRHKQASVMDLPAHV FT PKAQDVQNVQKP" FT CDS 297..1073 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q5DVC9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q5DVC9" FT /protein_id="CAI26264.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVAVPIAPATNRRRSW FT TYRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFEQRDDVKHTGIARCVSDVTRGSGITH FT RVGKRFCIKSIYILGKVWMDENIKKQNHTNNVMFFLVRDRRPSGSAPMDFGQVFNMFDN FT EPSTATVKNDLRDRLQVLRKFHATVVGGPSGMKEQALVKRFYRINNHVVYNHQEAAKYE FT NHTENALLLYMACTHYSNPVYATLKIRIYFYDAVTN" FT CDS complement(1070..1474) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q5DVC8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q5DVC8" FT /protein_id="CAI26265.1" FT /translation="MDSRTGELITAPQAQNGVFIWEINNPLYFTITSHEIRPFNMNHDI FT INIQIRFNHNLRKELGIHKCFLNFKVWTTLRPQTGRFLRVFRIQVLRYLDRLGVISINT FT VIRAVDHVLYDVLVNTLQVLEDHEIKFNIY" FT CDS complement(1215..1622) FT /gene="transcriptional transactivator protein" FT /product="AC2" FT /db_xref="GOA:Q5DVC7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q5DVC7" FT /protein_id="CAI26266.1" FT /translation="MRPSSPSTSHCSQVPIKVQHRIAKKRTIRRKRVDLDCGCSYYLHI FT DCSNHGFTHRGTHHCSSGTEWRVYLGDKQSPLFHDHQPRNKAIQHEPRHHQHPDKIQPQ FT PQEGTGDSQMFSQLQGLDDLTASDWSFLKGI" FT CDS complement(1531..2610) FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q5DVC6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q5DVC6" FT /protein_id="CAI26267.1" FT /translation="MAPLRRFKICAKNYFLTYPKCSLTKEETLSQIQSLQTPVNKLFIK FT ICRELHENGEPHLHVLIQFEGKYQCTNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTIEWGEFQIDGRSARGGQQSANDAYAAALNAGSKSEALRVIKELAPKDFVLQFH FT NLNSNLDRIFQEPPAPYVSPFLSSSFNQVPEELEEWVSENVMDAAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEERNAALKQWAIKNATFVTLHEPL FT FTSANQGPTPYSEEENHTA" FT CDS complement(2151..2453) FT /gene="AC4" FT /product="putative AC4 protein" FT /db_xref="GOA:Q5DVC5" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q5DVC5" FT /protein_id="CAI26268.1" FT /translation="MGNLTSMCLSNSKVSTSARIRDSSTWYPQPGQHISIRTFRELNPA FT PTSSPISTRTETPSNGENFKLMADLQGEGNNQPMTLTPQLLTQAVSQRLLESLRN" XX SQ Sequence 2777 BP; 714 A; 573 C; 650 G; 840 T; 0 other; accggatggc cgcgcccccg aaaaagaagt ggtccccccc actatactat gtcgtccaat 60 gaaattgtgt cctggaaggt tatttattgg gttttgtcct tatatacttg gccgctaagt 120 ttgtgggcct gtcacaatgt gggatccatt gttaaatgag ttccctgatt ctgttcatgg 180 ttttcgttgt atgcttgctg taaaatattt gcaggccgtt gaggaaacgt atgagcccaa 240 cactttgggc cacgatttaa ttcgcgatct tatctctgtt attagggctc gtgactatgt 300 cgaagcgacc cggcgatata atcatttcca cgcccgtctc gaaggttcgt cgaaggctga 360 acttcgacag cccatatacc aaccgtgttg ctgtccccat tgcccccgcc acaaacaggc 420 gtcggtcatg gacttaccgg cccatgtacc gaaagcccag gatgtacaga atgtacagaa 480 gccctgatgt tcctaagggc tgtgaaggcc catgtaaggt ccagtcattt gagcaaaggg 540 atgatgtgaa gcatacgggt attgctcgct gtgttagcga tgtgacgcgt ggttcgggta 600 tcactcatag ggttggtaag agattttgta ttaagtccat ttacatttta ggtaaagtat 660 ggatggatga aaatataaag aagcagaatc acacgaacaa cgtgatgttc ttcttggtcc 720 gagatcgcag gcccagtgga tcagcgccca tggactttgg gcaggtgttt aacatgtttg 780 acaatgagcc cagtactgcg actgtgaaga atgatttgcg agataggtta caggttttgc 840 gcaagtttca tgctaccgtt gttggtggtc cttctgggat gaaggaacag gctttagtta 900 agagatttta taggattaat aatcatgtag tttataatca ccaggaggca gcgaagtatg 960 aaaatcatac tgagaatgcg ttgttgttgt atatggcttg tactcattat tccaatcccg 1020 tgtacgctac attgaaaata cgcatctatt tctatgatgc agtgacaaat taataaatat 1080 taaattttat ttcatgatcc tccaaaacct ggagtgtatt tacaagtaca tcatacaata 1140 catgatcaac tgccctaatt acagtattaa ttgaaataac acctaatcta tctaaatatc 1200 tgaggacctg aattctaaat acccttaaga aacgaccagt ctgaggccgt aaggtcgtcc 1260 agaccttgaa gttgagaaaa catttgtgaa tccccagttc cttcctgagg ttgtggttga 1320 atcttatctg gatgttgatg atgtcgtggt tcatgttgaa tggccttatt tcgtggctgg 1380 tgatcgtgaa atagagggga ttgtttatct cccagataaa cacgccattc tgtgcctgag 1440 gagcagtgat gagttcccct gtgcgtgaat ccatggttgg agcagtcgat gtggagataa 1500 tatgagcagc cgcagtctag gtcaacccgt ttacgccgta tggttctctt cttcgctata 1560 cggtgttgga ccttgattgg cacttgtgaa caatggctcg tggagggtga cgaaggtcgc 1620 attcttaatt gcccactgct tgagtgctgc gttcctttcc tcgtccagaa attctttata 1680 ggacgacgtt gggcctggat tgcataggaa gattgtggga attccgcctt taatttgaat 1740 tggcttcccg tactttgtgt tgctttgcca gtccctctgc gctcccataa attccttaaa 1800 gtgctttaga taatgcgggt ctacgtcatc aatgacgttg taccacgcat cattgctgta 1860 cacctttggg ctgagatcaa gatggccaca taaatagtta tgtggtccca atgacctggc 1920 ccacattgtc tttccggtac gactatcacc ctcgattaca atactattcg gtctccacgg 1980 ccgcgcagcg gcatccatca cgttctcact cacccactct tcaagttctt ccggaacttg 2040 attaaaagaa gaagataaaa aaggagaaac ataaggagcc ggaggctcct gaaaaatcct 2100 atctaaatta ctatttaaat tatgaaattg taaaacaaaa tccttagggg ctaattcctt 2160 aatgactcta agagcctctg acttactgcc tgcgttaaga gctgcggcgt aagcgtcatt 2220 ggctgattgt tgccctcccc ttgcagatct gccatcaatt tgaaattctc cccattcgat 2280 ggtgtctccg tccttgtcga tataggactt gacgtcggag ctggatttag ctccctgaat 2340 gttcggatgg aaatgtgctg acctggttgg ggataccagg tcgaagaatc tctgattcgt 2400 gcactggtac ttaccttcga attggataag cacatggagg tgaggttccc cattctcgtg 2460 aagctctctg caaattttga tgaacagttt atttactggg gtttgtaggg attgtatttg 2520 ggaaagtgtt tcctctttgg tgagagagca ctttggataa gtgaggaaat aattttttgc 2580 gcaaatttta aatcgacgta gaggagccat ttagtcaatg tactccgatt gaccactaat 2640 tcatttgctg tctgcaatcg gagtattggt ggccaatata taggtgtact ccaaatggca 2700 ttatggtaaa tagctaaagt tttttaattt tgaaattcaa aatttgaaat tctaaaagcg 2760 gccatccgta taatatt 2777 //