ID   AJ851867; SV 1; linear; genomic RNA; STD; VRL; 1664 BP.
XX
AC   AJ851867;
XX
DT   27-JUN-2005 (Rel. 84, Created)
DT   27-JUN-2005 (Rel. 84, Last updated, Version 1)
XX
DE   Thunberg fritillary virus partial polyprotein gene, isolate Panan
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Thunberg fritillary mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1664
RA   Adams M.J.;
RT   ;
RL   Submitted (22-OCT-2004) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s00705-005-0519-8.
RX   PUBMED; 15789262.
RA   Wei C.B., Chen J., Zhang Q.Y., Shi Y.H., Lin L., Zheng H.Y., Adams M.J.,
RA   Chen J.;
RT   "A new potyvirus from Thunberg fritillary (Fritillaria thunbergii Miq.) in
RT   Zhejiang, China";
RL   Arch. Virol. 150(7):1271-1280(2005).
XX
DR   MD5; 6fe11b814e096ac5140731dc98bc3971.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1664
FT                   /organism="Thunberg fritillary mosaic virus"
FT                   /host="Fritillaria thunbergii"
FT                   /isolate="Panan"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zhejiang, Panan"
FT                   /db_xref="taxon:299200"
FT   CDS             <1..1437
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q4LCG9"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q4LCG9"
FT                   /protein_id="CAH65462.1"
FT                   /translation="GNNSGQPSTVVDNTIMVMLAVNYALRVNHITESAHDFIRYYINGD
FT                   DLLIAIRPDMEHLLDKFQESFQQLGLNYTFNSRTRNKTELWFMSHQGILRDGIFIPKLE
FT                   RERVVSILEWDRAELPEHRLEAICAAMIEAWGHDELIHEVRRFYHWVLQQEPYNELAAQ
FT                   GKAPYISEVALKALYTGTAATESELVRYYNTMERLNVVMDDEFCFQADRTEQIDTGRDQ
FT                   ARKRNQETNQGESSQQAIVREPDVNVGSAGALTVPRLREINSKINLPMVRGKRIVNLDH
FT                   LLLYTPQQTGMYNTRATQTQFAVWYDGVKQDYELEDVQMQIVLNGLMVWCIENGTSPNL
FT                   NGMWVMMDGDKQVEFPIKPLLDHAKPTFRQIMAHFSELAEAYIIKRNITKPYMPRYALK
FT                   RNLTDMSLAQYAFDFLEITSRTPARAREAQAQMKAAALKNARTRMFGLDGSVGTTEEDT
FT                   ERHTTTDVNRSMHSMLGVRM"
FT   mat_peptide     <1..627
FT                   /product="NIb protein"
FT   mat_peptide     628..1434
FT                   /product="coat protein"
FT   3'UTR           1438..1664
XX
SQ   Sequence 1664 BP; 528 A; 300 C; 413 G; 423 T; 0 other;
     gggaacaaca gcgggcagcc ttcaacagta gttgataaca cgataatggt gatgttagca        60
     gtgaattatg cgttgagagt gaatcatatc acggagagcg cacacgattt catcaggtat       120
     tacattaatg gtgacgattt gctaatagcc atacgccctg acatggaaca cttattggat       180
     aaatttcagg aaagttttca gcagttaggg ctgaactaca catttaactc gagaacaaga       240
     aacaaaacag aattgtggtt catgtcacat caaggaattc ttcgcgacgg tattttcatc       300
     cctaaactgg agagagagcg ggtagtgtca atacttgagt gggatagagc tgagttacct       360
     gaacatagac ttgaggcaat ttgtgcagcc atgattgagg cgtggggtca tgacgaattg       420
     attcacgaag tgcgtagatt ttatcattgg gtgcttcagc aagaaccata caatgagtta       480
     gcagcgcaag gaaaagcacc atatatttct gaagtagctt taaaggcttt gtacacaggc       540
     acagcagcta cggagagtga gcttgttcgg tactacaaca ctatggaacg tcttaatgtg       600
     gttatggatg acgaattttg ttttcaagct gataggacgg aacaaattga tactgggcga       660
     gatcaagcgc ggaaaagaaa tcaagaaaca aatcaagggg agagcagtca gcaagcgatt       720
     gtgcgagaac ctgatgtgaa cgttggcagt gctggagctt tgacggtccc tagactcagg       780
     gaaataaaca gtaaaatcaa tctaccaatg gtaagaggta aacgcattgt gaacttagat       840
     cacttgctgt tgtatacacc acagcaaact ggcatgtata acacgcgtgc aacacaaaca       900
     caattcgctg tttggtatga tggagttaag caggattacg agctcgaaga tgtccaaatg       960
     cagatcgtac taaatggatt aatggtttgg tgtatagaga atggcacttc accaaacttg      1020
     aatgggatgt gggtgatgat ggatggggat aagcaggttg aatttccaat aaaaccactt      1080
     cttgatcatg cgaaaccaac atttcgacag ataatggcac acttttctga actagcagag      1140
     gcgtacatta tcaaacgcaa cataacaaaa ccgtatatgc cacggtatgc cttaaaaaga      1200
     aatttaaccg atatgagcct cgcacagtat gcgtttgatt tcttagagat cacatctaga      1260
     acaccagcta gagcacgcga ggcacaagca caaatgaagg cagcggcatt aaagaatgca      1320
     cgtacaagaa tgtttggctt ggatggtagt gtcggaacaa cggaggagga cacggaaagg      1380
     cacacaacaa cagatgttaa ccgcagcatg catagcatgt tgggtgttag aatgtgatga      1440
     ccttggtttg aagctctatt ccagtgaggg ctagtaatca ctggggatat aatatcttta      1500
     ctcccgtaga ggtatcctct tcttaaatat agtacttaat tatcagtttg gtgttgtagg      1560
     gtatatccta cctgatatta tgatacatat atttcgaact gtttaagtgg gaaatcctgg      1620
     agtgaggcac agcctcgtgg acgtacttcc ttttgcagca aggg                       1664
//