ID   AJ844552; SV 1; linear; genomic RNA; STD; VRL; 1047 BP.
XX
AC   AJ844552;
XX
DT   05-OCT-2004 (Rel. 81, Created)
DT   05-OCT-2004 (Rel. 81, Last updated, Version 1)
XX
DE   Carnation mottle virus CP gene for Coat protein, genomic RNA
XX
KW   Coat protein; CP gene.
XX
OS   Carnation mottle virus
OC   Viruses; Riboviria; Tombusviridae; Procedovirinae; Alphacarmovirus.
XX
RN   [1]
RP   1-1047
RA   Raikhy G.;
RT   ;
RL   Submitted (04-OCT-2004) to the INSDC.
RL   Raikhy G., Plant Virus Lab, Floriculture Division, Institute of Himalayan
RL   Bioresource Tech., PO Box # 6, Palampur, Distt. Kangra, Himachal Pradesh
RL   -176 061, INDIA.
XX
RN   [2]
RA   Raikhy G., Hallan V., Kulshrestha S., Sandhu G., Verma R.R., Zaidi A.A.;
RT   "Variability studies of different Carnation mottle virus isolates infecting
RT   carnations in India";
RL   Unpublished.
XX
DR   MD5; e5d023223f359a4f3978db417bf1ed01.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1047
FT                   /organism="Carnation mottle virus"
FT                   /host="Dianthus caryophyllus"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Northern Himalayan Region"
FT                   /clone="390"
FT                   /db_xref="taxon:11986"
FT   CDS             1..1047
FT                   /gene="CP"
FT                   /product="Coat protein"
FT                   /function="Expression of coat protein"
FT                   /db_xref="GOA:Q5ZF40"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR013669"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q5ZF40"
FT                   /protein_id="CAH59636.1"
FT                   /translation="MEDKGEKIAMNPTVQTLAQKGDKLAVKLVTRGWASSSTNQKRRAE
FT                   MLAGYTPAILAFTPRRPRKTNPPPRTSRNSPGQAGKSMTMSKTELLSTVKGTTGVIPCF
FT                   EDWVVSPRNVAVFPQLSLLATNFNKYRITALTVKYSPAGSFETNGRVALGFNDDASDTP
FT                   PTTKVGFYDLGKHVETAAQTAKDLVIPVDGKTRFIRDSASDDAKLVDFGRIVLSTYGFD
FT                   KADTVVGELFIQYTIVLSDPTKAAKISQASNDKVSDGPTYVVPSVNGNELQLRVVAAGK
FT                   WCIIVRGTVEGGFTKPTLIGPGISGDVDYESARPIAICELVTQMEGQILKITKTSAEQP
FT                   LQWVVYRM"
XX
SQ   Sequence 1047 BP; 299 A; 253 C; 282 G; 213 T; 0 other;
     atggaagata aaggagaaaa gatcgcgatg aatcccactg tgcaaacatt ggcgcagaag        60
     ggggacaagt tagccgtgaa gttggtgaca aggggttggg cctcttcgag tacgaaccag       120
     aagaggagag ctgaaatgct cgctggatac actccggcga tcctagcctt cacaccccga       180
     cgaccacgga agacgaaccc tcctccaaga accagtagga attcaccagg acaagctgga       240
     aagtccatga cgatgagtaa gaccgaacta ttaagcaccg tcaaaggtac caccggtgtt       300
     atcccatgct ttgaagactg ggtcgtttcc ccccgaaacg tagccgtctt ccctcaactc       360
     tcgctgctgg cgacgaactt caacaagtac cgcattactg cgctcactgt gaagtactca       420
     cccgcgggca gcttcgagac caatgggagg gtggctctag gattcaacga tgacgcttcg       480
     gatacaccac caaccaccaa ggttggattt tacgatctgg gcaaacatgt ggaaactgct       540
     gcacagacag ccaaagatct agtgatacca gtagacggca aaacccggtt catcagggac       600
     tcggctagtg atgatgccaa actagtcgat tttggacgga tagtcttgtc aacatacggg       660
     tttgacaagg ctgacactgt ggtgggcgaa ttattcatac agtacacgat cgtgctgagt       720
     gacccaacca aggcggccaa aatttcacag gcaagcaacg ataaggtgtc ggacggacca       780
     acgtatgtgg tcccttcggt taatggcaac gagctacaac taagagtggt agccgctggg       840
     aaatggtgca ttatagtgcg gggtacggtt gagggcggct tcaccaaacc tacacttatt       900
     gggccaggaa tcagcggtga tgtggactat gaaagtgcca gacctatcgc catttgtgag       960
     ttggtgacac aaatggaggg ccaaatattg aaaatcacca agacctcagc agaacaacca      1020
     ctccaatggg ttgtttatag gatgtga                                          1047
//