ID   AJ844550; SV 1; linear; genomic DNA; STD; VRL; 989 BP.
XX
AC   AJ844550;
XX
DT   05-OCT-2004 (Rel. 81, Created)
DT   05-OCT-2004 (Rel. 81, Last updated, Version 1)
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DE   Carnation etched ring virus 5` non-coding region and MP gene for Movement
DE   protein, isolate Palampur
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KW   Movement protein; MP gene.
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OS   Carnation etched ring virus
OC   Viruses; Ortervirales; Caulimoviridae; Caulimovirus.
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RN   [1]
RP   1-989
RA   Raikhy G.;
RT   ;
RL   Submitted (03-OCT-2004) to the INSDC.
RL   Raikhy G., Plant Virus Lab, Floriculture Division, Institute of Himalayan
RL   Bioresouce Tech., PO Box # 6, Palampur, Distt. Kangra, Himachal Pradesh
RL   -176 061, INDIA.
XX
RN   [2]
RA   Raikhy G., Hallan V., Kulshrestha S., Verma R.R., Zaidi A.A.;
RT   "Studies on carnation etched ring virus isolates infecting carnations in
RT   India";
RL   Unpublished.
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DR   MD5; 92e17744746e6800f5aa10bf67e9fc64.
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FH   Key             Location/Qualifiers
FH
FT   source          1..989
FT                   /organism="Carnation etched ring virus"
FT                   /host="Dianthus caryophyllus"
FT                   /isolate="Palampur"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Nothern Himalayan Region, Palampur"
FT                   /db_xref="taxon:10640"
FT   CDS             30..989
FT                   /gene="MP"
FT                   /product="Movement protein"
FT                   /function="Essential for virus movement"
FT                   /db_xref="InterPro:IPR028919"
FT                   /db_xref="UniProtKB/TrEMBL:Q5ZF42"
FT                   /protein_id="CAH59634.1"
FT                   /translation="MNSSIEKQNSEIPEKENEEFTFQDNSQGFELEFSTNKKTLSKIQK
FT                   ANLSLKTNDAFNISFLKAFSRKNHIYYHVNYKEFSVDICDTHGKNYLPLVTKSEIKKNL
FT                   DKIRDEKVRSTISDIHFGAIKVLIKARFREGINSPIKMALIDDRITDRQDSILGAAHGN
FT                   LVYGKFMFTVYPKYTTSILDQRLDRTLAFIHHFERNDLMRKGDKVFSITYLVAYALANS
FT                   HHSIDYKEKDAIEIDDVFSEIGSVKSPTFTELDPEPNSWAIDIAQGKQPIGFKPKPIVS
FT                   NNFLRFDKETSPSSSHQKSLEEISDKIDTLVVKLNNIS"
XX
SQ   Sequence 989 BP; 370 A; 185 C; 164 G; 270 T; 0 other;
     tggtatcaga gccatagtgc tcaaaaatca tgaattcctc tattgaaaaa cagaattctg        60
     aaattcctga aaaggaaaat gaagagttta ctttccaaga taactctcaa ggatttgaat       120
     tagagttttc taccaacaag aaaactttat ctaaaattca aaaagctaat ctcagcttaa       180
     aaactaatga tgctttcaac attagtttcc ttaaggcatt cagccgaaaa aatcatatct       240
     actaccacgt gaattataaa gaattctctg tagatatatg tgatacgcat ggcaaaaact       300
     atttaccatt agtcactaaa tctgaaatca agaagaatct tgataaaata agggatgaga       360
     aagtaaggtc cactatctca gatatccact tcggagctat taaagttcta ataaaagcga       420
     gattccgaga agggataaat tctccgataa aaatggcgtt aatcgatgat agaatcaccg       480
     accgtcaaga cagtattcta ggagccgcac atggaaacct agtctacggt aaatttatgt       540
     tcaccgtcta ccctaagtat accacttcaa tcttagatca gaggttagac agaactctag       600
     cgttcatcca tcactttgag cgcaacgatc tcatgagaaa aggagataag gtctttagca       660
     ttacctacct agtagcttat gctttagcaa atagtcatca ctcgatagac tacaaagaaa       720
     aagacgctat tgaaatagat gatgtctttt ctgaaatagg atctgttaaa agcccaacct       780
     tcaccgagct tgacccagaa cctaattctt gggctataga catagcacaa ggaaaacaac       840
     ccatagggtt taaaccaaaa cctatagtta gcaataactt tcttaggttt gataaggaga       900
     caagtccatc ttcgtctcat caaaaatcac tagaagaaat tagtgataaa atagatacct       960
     tggtagttaa gttaaacaat atatcatga                                         989
//