ID   AJ831820; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   AJ831820;
XX
DT   20-SEP-2004 (Rel. 81, Created)
DT   01-APR-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate AH
XX
KW   HC protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1374
RA   Zhou X.;
RT   ;
RL   Submitted (16-SEP-2004) to the INSDC.
RL   Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268,
RL   Hangzhou, Zhejiang, 310029, CHINA.
XX
RN   [2]
RX   PUBMED; 18459837.
RA   Shi M., Li H.Y., Schubert J., Zhou X.;
RT   "Sequence analysis of CP and HC-Pro genes of Turnip mosaic virus isolates
RT   from China";
RL   Acta Virol. 52(1):59-62(2008).
XX
DR   MD5; b11cffc57429d919f4c144124e26fecb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Turnip mosaic virus"
FT                   /host="Brassica chinensis"
FT                   /isolate="AH"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Hefei:Anhui"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q659L9"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:Q659L9"
FT                   /protein_id="CAH42018.1"
FT                   /translation="SAGGANFWKGFDRCFLAYRSDNREHTCYSGLDVTECGEVAALMCL
FT                   AMFPCGKITCPDCVTDSELSQGQASGPSMKHRLTQLRDVIKSSYPRFKHAVQILDRYEQ
FT                   SLSSTNENYQDFAEIQSISDGVEKAAFPHVNKLNAILIKGATATGEEFSQATKHLLEIA
FT                   RYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDRNGNFIWGERGYHAKRFFSN
FT                   YFEIIDPKKGYTQYETRVVPNGSRKLAIGKLIVPTNFEVLREQMKGEPVEPYPVTVECV
FT                   SKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEENKMYIAK
FT                   EGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDV
FT                   ANAELPRMLVDHKTKIIHVVDSYGSLSTGYHVLKTNTVEQLIKFTRCNLESSLKHYRVG
FT                   "
FT   mat_peptide     <1..>1374
FT                   /product="HC protein"
XX
SQ   Sequence 1374 BP; 443 A; 299 C; 329 G; 303 T; 0 other;
     agtgcagggg gcgccaactt ctggaaaggc ttcgacagat gctttctcgc ataccgtagc        60
     gacaatcgcg agcatacatg ctattcaggg ctagatgtta ctgagtgcgg cgaggtggca       120
     gcactgatgt gtttggctat gttcccatgc ggaaagataa cctgccctga ctgtgtaaca       180
     gatagtgagc tatcccaagg acaagcaagc ggaccatcta tgaagcacag gttgacgcag       240
     ctacgcgatg tcatcaagtc aagctaccca cgcttcaagc atgcagtgca aatattagat       300
     agatatgagc aatcactgag cagtacaaac gagaactacc aagatttcgc agaaatccag       360
     agcataagcg atggagttga gaaagctgca ttcccacacg tcaacaagct aaacgcaata       420
     ttgatcaaag gggccacagc gacaggggag gaattctcgc aggctacgaa gcatttgctc       480
     gagatagcac gatacctgaa gaacagaact gagaacattg aaaagggttc actgaagtcc       540
     tttcgtaaca agatttccca gaaagcgcac atcaacccaa cactaatgtg cgacaaccag       600
     ctcgatagaa atggaaattt catatggggt gagagaggat accatgcaaa acggttcttc       660
     agcaactatt ttgagataat cgacccgaag aaaggttaca cccaatacga aacaagagtg       720
     gtaccaaatg ggtcacggaa acttgcaatc ggcaaactaa tagtcccaac gaactttgaa       780
     gttttgaggg aacagatgaa aggcgaaccg gtagaaccat acccagtaac agtcgagtgt       840
     gtgagcaagt tacagggcga cttcgtccac gcatgttgtt gtgtcacaac agaatcaggc       900
     gacccagtct tgtctgagat taaaatgcca actaaacacc atctagtgat tggtaacagc       960
     ggtgatccaa agtacataga tctccctgag atcgaggaga ataaaatgta catagcgaaa      1020
     gagggttatt gttacattaa tatcttccta gccatgttag taaatgtcaa ggagtcgcag      1080
     gcgaaggagt tcacgaaagt tgttagagac aaactagtcg gcgaacttgg caagtggcct      1140
     actctactag atgtagcaac cgcctgttat ttcttgaaag tgttttaccc agacgttgct      1200
     aacgccgaac tgccacgcat gctagtggat cataagacaa agataattca tgtcgttgat      1260
     tcatatgggt cactgtcaac tggatatcac gtccttaaga caaacactgt ggaacaactc      1320
     attaaattca cgagatgcaa tttggagtca agcttgaaac actaccgcgt cgga            1374
//