ID   AJ831802; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   AJ831802;
XX
DT   20-SEP-2004 (Rel. 81, Created)
DT   01-APR-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate YN2
XX
KW   HC protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1374
RA   Zhou X.;
RT   ;
RL   Submitted (15-SEP-2004) to the INSDC.
RL   Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268,
RL   Hangzhou, Zhejiang, 310029, CHINA.
XX
RN   [2]
RX   PUBMED; 18459837.
RA   Shi M., Li H.Y., Schubert J., Zhou X.;
RT   "Sequence analysis of CP and HC-Pro genes of Turnip mosaic virus isolates
RT   from China";
RL   Acta Virol. 52(1):59-62(2008).
XX
DR   MD5; dd8cd8d73b13dbb25001fa901f56cf8a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Turnip mosaic virus"
FT                   /host="radish"
FT                   /isolate="YN2"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q659N7"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:Q659N7"
FT                   /protein_id="CAH55686.1"
FT                   /translation="SAAGANFWKGFDRCFLAYRSDNREHTCYSGLDVTECGEVAALMCL
FT                   AMFPCGKITCPDCVTDSELSQGQASGPSMKHRLMQLRDVIKSSYPRFKHAVQILDRYEQ
FT                   SLSSTNENYQDFAEIQSISDGVEKAAFPHVNKLNAILIKGATATGEEFSQATKHLLEIA
FT                   RYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDRNGNFIWGERGYHAKRFFSN
FT                   YFEIIDPKKGYTQYETRVVPNGSRKLAIGKLIVPTNFEVLREQMKGEPVEPYPVTVECV
FT                   SKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEENKMYIAK
FT                   EGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDV
FT                   ANAELPRMLVDHKTKIIHVVDSYGSLSTGYHVLKTNTVEQLIKFTRCNLESSLKHYRVG
FT                   "
FT   mat_peptide     <1..>1374
FT                   /product="HC protein"
XX
SQ   Sequence 1374 BP; 438 A; 287 C; 333 G; 316 T; 0 other;
     agtgcagcag gagccaactt ctggaaaggc ttcgatagat gctttctcgc ataccgtagt        60
     gacaatcgcg agcatacatg ctattcaggg ttagatgtca ctgagtgcgg cgaggtggca       120
     gcactgatgt gtttggctat gttcccatgc ggaaagataa cctgtcctga ctgtgtaaca       180
     gatagtgaac tatcccaagg acaagcaagc ggaccatcta tgaagcacag gttgatgcag       240
     ctgcgcgatg tcatcaaatc aagctaccca cgcttcaagc atgcagtgca gatactagat       300
     aggtatgagc aatcactgag cagtacgaac gagaactacc aagatttcgc agaaatccag       360
     agtataagcg atggagttga gaaagctgca ttcccacatg tcaacaagct aaacgcaata       420
     ttgatcaaag gggccacagc gacaggagag gaattctcgc aggctacgaa gcatttgctc       480
     gagatagcac gatacctgaa gaacagaact gagaacattg agaagggttc actgaagtcc       540
     tttcgcaaca agatttccca gaaagcgcac atcaacccaa cactaatgtg tgacaaccag       600
     ctcgatagga atggaaattt catatggggt gagagaggat accatgcaaa acgattcttt       660
     agcaactact ttgagataat tgatccaaag aaaggctaca cccagtatga aacaagagtg       720
     gtaccaaatg ggtcacggaa actcgcaatc ggcaagctaa tagtcccgac gaactttgaa       780
     gtcttaaggg aacagatgaa aggcgaaccg gtagaaccat acccagtaac agtcgagtgt       840
     gtaagcaagt tacagggtga tttcgtccac gcatgttgtt gtgttaccac agaatcaggc       900
     gatccagttt tgtctgaaat caaaatgcca actaaacacc acctagtgat tggcaacagc       960
     ggtgatccaa agtacataga tctccctgag attgaggaga ataagatgta catagcgaag      1020
     gaaggttatt gttacatcaa tatcttccta gctatgttgg tgaatgtcaa ggaatcgcag      1080
     gcaaaggagt tcacgaaagt tgttagggac aagctggttg gcgaacttgg caagtggccc      1140
     actctgttag atgtagcaac tgcctgttat ttcctgaaag tattttaccc agacgttgct      1200
     aatgccgaat tgccacgcat gttggtggac cataagacaa agataattca tgtcgttgat      1260
     tcatatgggt cactgtcaac tggatatcac gttcttaaga caaacactgt ggaacaactt      1320
     atcaaattca cgagatgcaa tttggagtca agtttgaaac actaccgcgt cgga            1374
//