ID   AJ831801; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   AJ831801;
XX
DT   20-SEP-2004 (Rel. 81, Created)
DT   01-APR-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate YN1
XX
KW   HC protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1374
RA   Zhou X.;
RT   ;
RL   Submitted (15-SEP-2004) to the INSDC.
RL   Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268,
RL   Hangzhou, Zhejiang, 310029, CHINA.
XX
RN   [2]
RX   PUBMED; 18459837.
RA   Shi M., Li H.Y., Schubert J., Zhou X.;
RT   "Sequence analysis of CP and HC-Pro genes of Turnip mosaic virus isolates
RT   from China";
RL   Acta Virol. 52(1):59-62(2008).
XX
DR   MD5; 519b1d312e05bb761707615fc76a5345.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Turnip mosaic virus"
FT                   /host="Brassica chinensis"
FT                   /isolate="YN1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q659N8"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:Q659N8"
FT                   /protein_id="CAH55685.1"
FT                   /translation="SAAGANFWKGFDRCFLAYRSDNREHTCYSGLDVTECGEVAALMCL
FT                   AMFPCGKITCPDCVTDSELSQGQASGPSMKHRLTQLRDVIKSSYPRFKHAVQILDRYEQ
FT                   SLSSANENYQDFAEIQSISDGIEKAAFPHVNKLNAILIKGATATGEEFSQATKHLLEIA
FT                   RYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDRNGNFIWGERGYHAKRFFSN
FT                   YFEIIDPKKGYTQYETRVVPNGSRKLAIGKLIVPTNFEVLREQMKGEPVEPYPVTVECV
FT                   SKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEENKMYIAK
FT                   EGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDV
FT                   ANAELPRMLVDHKTKIIHVVDSYGSLSTGYHVLKTNTVEQLIKFTRCNLESSLKHYRVG
FT                   "
FT   mat_peptide     <1..>1374
FT                   /product="HC protein"
XX
SQ   Sequence 1374 BP; 441 A; 296 C; 329 G; 308 T; 0 other;
     agtgcagcag gagccaactt ctggaaaggc ttcgatagat gcttcctcgc ataccgtagt        60
     gacaatcgcg aacatacatg ctattcaggg ttagatgtca ctgagtgcgg cgaggtggca       120
     gcactgatgt gtttggctat gttcccatgc ggaaagataa cctgccctga ctgtgtaaca       180
     gatagtgagc tatcccaagg acaagcaagc ggaccatcta tgaagcacag gttgacgcag       240
     ctgcgcgatg tcatcaagtc aagctaccca cgcttcaagc atgcagtgca gatactagat       300
     aggtatgagc aatcactgag tagtgcgaac gagaactacc aagatttcgc agaaatccag       360
     agtataagcg atggaattga gaaagctgca ttcccacacg tcaacaagct aaacgcaata       420
     ttgattaaag gggccacagc gacaggggag gaattctcgc aggctacgaa gcatttgctt       480
     gagatagcac gatacctgaa aaacagaact gagaacattg agaagggttc actgaagtct       540
     tttcgcaaca agatttctca gaaagcgcac atcaacccaa cactaatgtg cgacaaccag       600
     ctcgatagaa atggcaattt catatggggt gagagagggt atcatgcaaa acgattcttc       660
     agcaactact ttgagataat cgatccaaag aaaggctaca cccaatacga gacaagagtg       720
     gtaccaaatg ggtcacggaa acttgcaatc ggcaaactaa tagtcccaac gaacttcgaa       780
     gtcttaaggg aacagatgaa aggcgaaccg gtagaaccgt acccagtaac agtcgaatgt       840
     gtgagtaagt tacagggtga cttcgtccac gcatgttgtt gtgtcacaac agaatcaggc       900
     gacccagtct tgtctgaaat caaaatgcca actaaacacc acctggtaat tggtaacagc       960
     ggcgatccaa agtacataga tctccctgag atcgaggaga ataaaatgta catagcgaaa      1020
     gaaggttatt gttacatcaa catcttccta gctatgttgg taaatgtcaa ggagtcgcag      1080
     gcaaaggagt tcacgaaagt tgttagggac aagctagtcg gcgaacttgg caagtggccc      1140
     actctactag atgtagcaac cgcttgttat ttcctgaaag tgttttaccc agacgttgct      1200
     aatgctgaat tgccacgcat gttagtggat cataagacaa agataattca tgtcgttgat      1260
     tcatatgggt cactgtcaac tgggtatcac gtccttaaga caaacactgt ggaacaactc      1320
     attaaattca cgagatgcaa tttggaatca agcttgaaac actaccgcgt cggt            1374
//