ID   AJ831800; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   AJ831800;
XX
DT   20-SEP-2004 (Rel. 81, Created)
DT   01-APR-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate ZJ7
XX
KW   HC protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1374
RA   Zhou X.;
RT   ;
RL   Submitted (15-SEP-2004) to the INSDC.
RL   Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268,
RL   Hangzhou, Zhejiang, 310029, CHINA.
XX
RN   [2]
RX   PUBMED; 18459837.
RA   Shi M., Li H.Y., Schubert J., Zhou X.;
RT   "Sequence analysis of CP and HC-Pro genes of Turnip mosaic virus isolates
RT   from China";
RL   Acta Virol. 52(1):59-62(2008).
XX
DR   MD5; eaa3a2bd34803811f6d94dc9acde6d24.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Turnip mosaic virus"
FT                   /host="Brassica juncea"
FT                   /isolate="ZJ7"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q659N9"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:Q659N9"
FT                   /protein_id="CAH55684.1"
FT                   /translation="SAAGANFWKGFDRCFLAYRSDNREHTCYSGLDVTECGEVAALMCL
FT                   AMFPCGKITCPDCVTDSELSQGQASGPSMKHRLTQLRDVIKSSYPRFKHAVQILDRYEQ
FT                   SLSSENENYQDFAEIQSISDGVEKAAFPHVNKLNAILIKGATATGEEFSQATKHLLEIA
FT                   RYLKNRTENIEKGSLKSFRNKISQKAHVNPTLMCDNQLDRNGNFIWGERGYHAKRFFSN
FT                   YFEIIDPKKGYTQYETRVVPNGSRKLAIGKLIVPTNFEVLREQMKGEPVEPYPVTVECV
FT                   SKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEENKMYIAK
FT                   EGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDV
FT                   ANAELPRMLVDHKTKIIHVVDSYGSLSTGYHVLKTNTVEQLIKFTRCNLESSLKHYRVG
FT                   "
FT   mat_peptide     <1..>1374
FT                   /product="HC protein"
XX
SQ   Sequence 1374 BP; 442 A; 297 C; 330 G; 305 T; 0 other;
     agtgcagcag gagccaactt ctggaaaggc ttcgacagat gctttctcgc ataccgtagt        60
     gacaatcgcg agcatacatg ctattcaggg ctagatgtta ctgagtgcgg cgaggtggca       120
     gcactgatgt gtttggctat gttcccatgc ggaaagataa cctgccctga ctgtgtgaca       180
     gatagtgagc tatcccaagg acaagcaagc gggccatcta tgaagcacag gttgacgcag       240
     ctacgcgatg tcatcaagtc aagctaccca cgcttcaagc atgcagtgca gatactagat       300
     aggtatgagc aatcactgag cagtgaaaac gagaattacc aagatttcgc agagatccag       360
     agtataagtg atggagttga gaaagctgca ttcccacacg tcaataagct aaacgcaata       420
     ttgatcaaag gggccacagc gacaggggag gaattctcgc aggctacgaa gcatttgctc       480
     gagatagcac gatacctgaa gaacagaact gagaatattg agaagggttc actgaagtcc       540
     tttcgcaaca agatttccca gaaagcgcac gtcaacccaa cactaatgtg cgataaccag       600
     ctcgatagaa atggaaactt catatggggt gagagaggat accatgcaaa acgattcttc       660
     agcaactact ttgagataat cgatccaaag aaaggctaca cccaatacga gacaagagtg       720
     gtaccaaatg ggtcacgaaa acttgcaatc ggcaaactaa tagtcccaac gaacttcgaa       780
     gttctaaggg aacagatgaa aggcgaaccg gtagaaccat acccagtaac agtcgagtgt       840
     gtgagcaagt tacagggtga cttcgttcat gcatgttgtt gtgtcacaac agaatcaggc       900
     gacccagtct tgtctgaaat taaaatgcca accaaacacc atctagtgat tggcaacagc       960
     ggcgatccaa agtacataga tctccctgag atcgaggaaa ataagatgta catagcgaaa      1020
     gaaggttatt gttacatcaa catcttccta gctatgctag taaatgtcaa ggagtcgcag      1080
     gcaaaggagt tcacgaaagt tgttagggat aaactagttg gcgaacttgg caagtggccc      1140
     actctgctag atgtagcaac cgcttgttat ttcctgaaag tattttaccc agacgttgct      1200
     aacgccgaat tgccacgcat gctagtggac cataagacaa agataattca tgtcgttgat      1260
     tcatatgggt cactgtcaac tggatatcac gtccttaaga ctaacactgt ggaacaactc      1320
     attaaattca cgagatgcaa tttggagtca agcttgaaac actaccgtgt cgga            1374
//