ID   AJ831799; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   AJ831799;
XX
DT   20-SEP-2004 (Rel. 81, Created)
DT   01-APR-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate GX
XX
KW   HC protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1374
RA   Zhou X.;
RT   ;
RL   Submitted (15-SEP-2004) to the INSDC.
RL   Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268,
RL   Hangzhou, Zhejiang, 310029, CHINA.
XX
RN   [2]
RX   PUBMED; 18459837.
RA   Shi M., Li H.Y., Schubert J., Zhou X.;
RT   "Sequence analysis of CP and HC-Pro genes of Turnip mosaic virus isolates
RT   from China";
RL   Acta Virol. 52(1):59-62(2008).
XX
DR   MD5; 78ccf15e7583fe591f3aa7e9d3a9032b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Turnip mosaic virus"
FT                   /host="Brassica chinensis"
FT                   /isolate="GX"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q659P0"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:Q659P0"
FT                   /protein_id="CAH55683.1"
FT                   /translation="SAAGANFWKGFDRCFLAYRSDNREHTCYSGLDVTECGEVAALMCL
FT                   AMFPCGKITCPDCVTDSELSQGQASGPSMKHRLTQLRDVIKSSYPRFKHAVQILDRYEQ
FT                   SLSSTNENYQDFAEIQSISDGVEKAAFPHVNKLNAILIKGATATGEEFSQATKHLLEIA
FT                   RYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDRNGNFIWGERGYHAKRFFSN
FT                   YFEIIDPKKGYTQYETRVVPNGSRKLAIGKLIVPTNFEVLREQMKGEPVEPYPVTVECV
FT                   SKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEENKMYIAK
FT                   EGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDV
FT                   ANAELPRMLVDHKTKIIHVVDSYGSLSTGYHVLKTNTVEQLIKFTRCNLESSLKHYRVG
FT                   "
FT   mat_peptide     <1..>1374
FT                   /product="HC protein"
XX
SQ   Sequence 1374 BP; 444 A; 284 C; 328 G; 318 T; 0 other;
     agtgcagcag gagccaactt ctggaaaggc ttcgacagat gctttctcgc ataccgtagt        60
     gacaatcgcg agcatacatg ctattcaggg ctagatgtta ctgagtgtgg cgaggtggca       120
     gcactaatgt gtttggctat gttcccatgc ggaaagataa cttgccctga ttgtgtaaca       180
     gatagtgagc tatcccaagg acaagcaagt ggaccatcta tgaagcacag gttgacgcag       240
     ctacgcgatg tcatcaaatc aagctaccca cgcttcaagc atgcagtgca gatattagac       300
     aggtatgagc aatcactgag cagtacaaac gagaactacc aagatttcgc agaaatccag       360
     agtataagcg atggagttga gaaagctgca ttcccacacg tcaacaagct aaacgcaata       420
     ttgattaaag gggccacagc aacaggggag gaattctcgc aggctacaaa gcatttgctt       480
     gagatagcac gatacctgaa gaacagaact gagaacatcg agaagggctc actgaagtct       540
     tttcgcaaca agatttctca gaaagcgcac atcaacccaa cactaatgtg tgacaaccag       600
     ctcgatagga atggaaattt catatggggt gagagaggat atcatgcaaa acgattcttt       660
     agcaattact ttgagataat cgatccaaag aaaggctaca cccagtatga gacaagagtg       720
     gtgccaaatg ggtcacggaa acttgcaatc ggcaagctaa tagtcccgac aaacttcgaa       780
     gttttaaggg aacagatgaa aggcgaaccg gtagaaccat acccagttac agtagagtgt       840
     gtgagcaagt tacagggtga ctttgtccac gcatgttgtt gcgttacaac agaatcaggc       900
     gacccagtct tgtctgaaat taaaatgcca actaaacacc acctagtgat cggtaacagc       960
     ggtgatccaa agtacataga tctccctgag attgaggaga ataaaatgta catagcgaaa      1020
     gaaggttatt gctacattaa tatcttccta gccatgttag tgaatgtcaa agaatcacag      1080
     gcaaaggagt tcacgaaggt tgttagggac aaactagttg gcgaacttgg caagtggccc      1140
     actttgttgg atgtagcaac cgcctgttat ttcctgaagg tattttaccc agacgttgcg      1200
     aacgccgaat tgccacgcat gttagtggat cataagacaa agataattca tgttgttgat      1260
     tcatatgggt cattgtcaac tggatatcac gtccttaaga caaacaccgt tgaacagctc      1320
     attaaattca cgagatgcaa tttggagtca agcttgaaac attaccgcgt cgga            1374
//