ID   AJ831798; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   AJ831798;
XX
DT   20-SEP-2004 (Rel. 81, Created)
DT   01-APR-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate ZJ6
XX
KW   HC protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1374
RA   Zhou X.;
RT   ;
RL   Submitted (15-SEP-2004) to the INSDC.
RL   Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268,
RL   Hangzhou, Zhejiang, 310029, CHINA.
XX
RN   [2]
RX   PUBMED; 18459837.
RA   Shi M., Li H.Y., Schubert J., Zhou X.;
RT   "Sequence analysis of CP and HC-Pro genes of Turnip mosaic virus isolates
RT   from China";
RL   Acta Virol. 52(1):59-62(2008).
XX
DR   MD5; f260ba5dde02715aa50281dde40005e4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Turnip mosaic virus"
FT                   /host="Brassica juncea"
FT                   /isolate="ZJ6"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q659P1"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:Q659P1"
FT                   /protein_id="CAH55682.1"
FT                   /translation="SAGGANFWKGFDRCFLAYRSDNREHTCYSGLDVTECGEVAALMCL
FT                   AMFPCGKITCPDCVTDSELSQGQASGPSMQHRLTQLRDVIKSSYPRFKHAVQILDRYEQ
FT                   SLSSTNENYQDFAEIQSISDGVEKAAFPHVNKLNAILIKGATATGEEFSQATKHLLEIA
FT                   RYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDRNGNFIWGERGYHAKRFFSN
FT                   YFEIIDPKKGYTQYETRVVPNGSRKLAIGKLIVPTNFEVLREQMKGEPVEPYPVTVECV
FT                   SKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEENKMYIAK
FT                   EGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDV
FT                   ANAELPRMLVDHKTKIIHVVDSYGSLSTGYHVLKTNTVEQLIKFTRCNLESSLKHYRVG
FT                   "
FT   mat_peptide     <1..>1374
FT                   /product="HC protein"
XX
SQ   Sequence 1374 BP; 448 A; 296 C; 325 G; 305 T; 0 other;
     agtgcagggg gagccaactt ttggaaaggc ttcgacagat gctttctcgc ataccgtagt        60
     gacaatcgcg aacatacatg ctattcaggg ctagatgtta ctgagtgcgg cgaggtggca       120
     gcactgatgt gtttagctat gttcccatgc ggaaagataa cctgccctga ctgtgtaaca       180
     gatagtgagc tatcccaagg acaagcaagt ggaccatcta tgcagcacag gttgacgcag       240
     ctgcgcgatg tcatcaagtc aagctaccca cgcttcaagc atgcagtgca gatactagat       300
     aggtacgagc aatcactgag cagtacaaac gaaaactacc aggatttcgc agaaatccag       360
     agcataagcg atggagttga gaaagctgca ttcccacacg tcaacaagct aaacgcaata       420
     ttgatcaaag gggccacagc aacaggggag gaattctcgc aggctacgaa gcatttgctc       480
     gagatagcac gatatctgaa gaacagaact gagaacattg agaagggttc actgaagtcc       540
     tttcgcaaca agatttccca gaaagcgcac atcaacccaa cactaatgtg cgacaaccag       600
     ctcgatagaa atggaaattt catatggggt gagagaggat accatgcaaa acgattcttc       660
     agcaactact ttgagataat cgatccaaag aaaggctaca cccaatatga gacaagagtg       720
     gtaccaaatg ggtcacggaa acttgcaatc ggcaaactaa tagtcccaac gaacttcgaa       780
     gttctaaggg aacagatgaa aggcgaaccg gtagaaccat acccagtaac agtcgagtgt       840
     gtgagcaaat tacagggtga ctttgtccat gcatgttgtt gtgtcacaac agaatcaggc       900
     gacccagtct tgtctgaaat aaaaatgcca accaaacacc atctagtgat tggcaacagc       960
     ggcgatccaa agtacataga tcttcctgag atcgaggaga ataaaatgta catagcgaaa      1020
     gaaggttatt gttacatcaa tatcttccta gctatgctag taaatgtcaa ggagtcgcag      1080
     gcaaaggagt tcacgaaagt tgttagggac aaactagttg gcgaacttgg caagtggccc      1140
     actctgttag atgtagcaac cgcttgttat ttcctgaaag tattttaccc agacgttgct      1200
     aacgctgaat tgccacgcat gctagtggac cataagacaa agataattca tgtcgttgat      1260
     tcatatgggt cactgtcaac tggatatcat gtccttaaga caaacactgt ggaacaactc      1320
     attaaattca cgagatgcaa tttggagtca agcttgaaac attaccgcgt cgga            1374
//