ID   AJ831797; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   AJ831797;
XX
DT   20-SEP-2004 (Rel. 81, Created)
DT   01-APR-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate ZJ5
XX
KW   HC protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1374
RA   Zhou X.;
RT   ;
RL   Submitted (15-SEP-2004) to the INSDC.
RL   Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268,
RL   Hangzhou, Zhejiang, 310029, CHINA.
XX
RN   [2]
RX   PUBMED; 18459837.
RA   Shi M., Li H.Y., Schubert J., Zhou X.;
RT   "Sequence analysis of CP and HC-Pro genes of Turnip mosaic virus isolates
RT   from China";
RL   Acta Virol. 52(1):59-62(2008).
XX
DR   MD5; 9744b54bedb91c76af7e1c2d9a7c9c75.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Turnip mosaic virus"
FT                   /host="Brassica juncea"
FT                   /isolate="ZJ5"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q659P2"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:Q659P2"
FT                   /protein_id="CAH55681.1"
FT                   /translation="SAAGANFWKGFDRCFLAYRSDNREHTCYSGLDVTECGEVAALMCL
FT                   AMFPCGKITCPDCVTDSELSQGQASGPSMKHRLTQLREVIKSSYPRFKHAVQILDRYEQ
FT                   SLSSTNENYQDFAEIQSISDGVEKAAFPHVNKLNAILIKGTTATGEEFSQATKHLLEIA
FT                   RYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDRNGNFIWGERGYHAKRFFSN
FT                   YFEIIDPKKGYTQYETRVVPNGSRKLAIGKLIVPTNFEVLREQMKGEQVEPYPVTVECV
FT                   SKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEENKMYIAK
FT                   EGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDV
FT                   ANAELPRMLVDHKTKIIHVVDSYGSLSTGYHVLKTNTVEQLIKFTRCNLESSLKHYRVG
FT                   "
FT   mat_peptide     <1..>1374
FT                   /product="HC protein"
XX
SQ   Sequence 1374 BP; 445 A; 293 C; 327 G; 309 T; 0 other;
     agtgcagcag gagccaactt ctggaaaggc ttcgacagat gctttctcgc ataccgtagt        60
     gacaatcgcg agcatacatg ctattcaggg ctagatgtta ctgagtgcgg cgaggtggca       120
     gcactgatgt gtttggctat gttcccatgc ggaaagataa cctgccctga ctgtgtaaca       180
     gatagtgagc tatcccaagg acaagcaagc ggaccatcta tgaagcacag gttgacgcag       240
     ctacgcgaag tcatcaagtc aagctaccca cgcttcaagc atgcagtgca gatattagat       300
     aggtatgagc aatcactgag cagtacaaac gaaaactacc aagatttcgc agaaatccag       360
     agtataagcg atggagttga gaaagctgca ttcccacacg ttaacaagct aaacgcaata       420
     ttgatcaaag ggaccacagc aacaggggaa gaattctcgc aggctacgaa gcatttgctc       480
     gagatagcac gatacctgaa gaacagaact gagaacattg agaagggttc actgaagtcc       540
     tttcgcaata agatttccca gaaagcacac atcaacccaa cactgatgtg cgacaaccag       600
     ctcgatagaa atggaaattt catatggggt gagagaggat accatgcaaa acgattcttt       660
     agcaactatt tcgagataat cgatccgaag aaaggctaca cccagtacga gacaagagtt       720
     gtgcctaatg ggtcacggaa acttgcaatt ggcaaactaa tagtcccaac aaacttcgaa       780
     gttttaaggg aacaaatgaa aggcgagcaa gtagaaccgt acccagtaac agtcgaatgt       840
     gtgagcaagt tgcagggtga cttcgtccac gcgtgttgtt gtgttacaac agaatcaggt       900
     gacccagtct tgtctgaaat caaaatgcca actaaacacc acctagtgat tggtaacagc       960
     ggcgatccaa agtacataga tctccctgag atcgaggaga ataaaatgta catagcgaaa      1020
     gaaggttatt gttacatcaa catcttccta gctatgttgg tgaatgtcaa ggagtcgcag      1080
     gcaaaggagt ttacgaaagt tgttagggac aaactagtcg gcgagcttgg caagtggccc      1140
     actctactgg atgtagcaac cgcttgttat ttcctgaaag tattttaccc agacgttgcc      1200
     aacgctgaat tgccacgcat gttagtggat cataagacaa agataattca tgtcgttgat      1260
     tcatatgggt cactgtcaac tggatatcac gtccttaaga caaacactgt ggaacaactc      1320
     attaaattca cgagatgcaa tttggagtca agcttgaaac actaccgtgt cgga            1374
//