ID   AJ831796; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   AJ831796;
XX
DT   20-SEP-2004 (Rel. 81, Created)
DT   01-APR-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate JX
XX
KW   HC protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC   Patatavirales; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1374
RA   Zhou X.;
RT   ;
RL   Submitted (15-SEP-2004) to the INSDC.
RL   Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268,
RL   Hangzhou, Zhejiang, 310029, CHINA.
XX
RN   [2]
RA   Shi M., Li H.Y., Schubert J., Zhou X.;
RT   "Sequence analysis of cp and hc-pro genes of turnip mosaic virus isolates
RT   from china";
RL   Acta Virol. 52:59-62(2008).
XX
DR   MD5; aa5a84f6a88a1d4c1eb9778672996062.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Turnip mosaic virus"
FT                   /host="radish"
FT                   /isolate="JX"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q659P3"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:Q659P3"
FT                   /protein_id="CAH55680.1"
FT                   /translation="SAAGANFWKGFDRCFLAYRGDNREHTCYTGLDVTECGEVAALMCL
FT                   AMFPCGKITCPDCVTDSELSQGQASGPSIKHKLAQLREVIKSSYPRFKHAVQILDRYEQ
FT                   SLSSANENYQDFAEIQSISDGTDKAAFPHINKLNAILIKGATATGEEFSQATKYLLEIA
FT                   RYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDKNGNFIWGERGYHAKRFFSN
FT                   YFEIIDPKKGYTQYETRIVPNGSRKLAIGKLIVPTNFEVLREQMKGEPVEPHPITVECV
FT                   SKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEENKMYIAK
FT                   EGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDV
FT                   ANAELPRMLVDHKTKIIHVVDSYGSLSTGYHILKTNTVEQLIKFTRCNLESSLKHYRVG"
FT   mat_peptide     <1..>1374
FT                   /product="HC protein"
XX
SQ   Sequence 1374 BP; 450 A; 282 C; 321 G; 321 T; 0 other;
     agtgcggcag gagccaattt ttggaaagga tttgacagat gtttcctcgc atatcgaggt        60
     gacaaccgtg aacatacatg ttatacggga ttggatgtca ccgagtgtgg agaagttgca       120
     gcgttaatgt gtttagccat gttcccatgt ggaaaaataa cttgtcctga ctgcgtaacg       180
     gacagcgagt tgtctcaagg gcaggcaagt ggaccatcca taaaacacaa gttggcacaa       240
     ctacgtgagg ttatcaagtc cagttatcca cggttcaaac atgcagtaca aatactcgac       300
     agatatgagc agtcattgag cagtgcaaat gagaactacc aggactttgc ggaaattcaa       360
     agcataagtg atggaacaga caaagcagcg tttccgcata ttaataaact aaacgcaata       420
     ttaattaagg gagcgacagc aactggagag gaattctcgc aagcaacaaa gtacttgctc       480
     gagatagccc ggtatctgaa gaacagaacc gaaaatattg aaaagggttc gcttaagtcc       540
     ttccgcaata agatctctca aaaggcgcac ataaacccaa cattgatgtg tgacaatcag       600
     ctcgacaaga acggcaactt tatatggggc gagagaggtt atcacgcgaa gcggttcttt       660
     agcaactact tcgagataat cgatccaaag aaaggctaca ctcaatacga gacgagaata       720
     gtgccaaacg ggtcgcgaaa gctcgcaatt ggcaaactca tagtcccaac gaatttcgaa       780
     gtcctgaggg agcagatgaa aggcgaaccc gtagagccac atccaatcac agttgagtgc       840
     gtaagcaaac tacagggtga cttcgttcat gcgtgctgtt gtgttacaac agagtcaggc       900
     gacccagtct tgtctgaaat taaaatgcca actaagcacc acctggtaat tggtaatagc       960
     ggcgacccaa agtacatcga tctccctgag attgaggaaa acaagatgta catagcgaaa      1020
     gaaggttatt gctacattaa tatcttctta gctatgttag ttaatgttaa agagtcgcaa      1080
     gcaaaagaat ttacaaaagt ggtcagagac aaactggttg gagaacttgg caaatggccc      1140
     actttgttgg atgtagcgac tgcatgttac ttcctaaaag tgttttaccc tgatgtcgct      1200
     aacgctgaat tgccacgcat gctagtggat cacaaaacga agattatcca cgtagtcgac      1260
     tcgtatgggt cactgtcaac aggataccac atccttaaga caaacaccgt ggaacaactt      1320
     attaaattca ctaggtgcaa tttagaatca agtttgaagc actatcgtgt tgga            1374
//