ID   AJ831793; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
XX
AC   AJ831793;
XX
DT   20-SEP-2004 (Rel. 81, Created)
DT   01-APR-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate ZJ2
XX
KW   HC protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1374
RA   Zhou X.;
RT   ;
RL   Submitted (15-SEP-2004) to the INSDC.
RL   Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268,
RL   Hangzhou, Zhejiang, 310029, CHINA.
XX
RN   [2]
RX   PUBMED; 18459837.
RA   Shi M., Li H.Y., Schubert J., Zhou X.;
RT   "Sequence analysis of CP and HC-Pro genes of Turnip mosaic virus isolates
RT   from China";
RL   Acta Virol. 52(1):59-62(2008).
XX
DR   MD5; 1e6c4965913614b427aebd3abec15c0f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1374
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ZJ2"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1374
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q659P6"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:Q659P6"
FT                   /protein_id="CAH42003.1"
FT                   /translation="SAAGANFWKGFDRCFLAYRSDNREHTCYSGLDVTECGEVAALMCL
FT                   AMFPCGKITCPDCVTDSELSQGQASGPSMQHRLTQLRDVIKSSYPRFKHAVQILDRYEQ
FT                   SLSSANENYQDFAEIQSISDGVEKAAFPHVNKLNAILIKGATATGEEFSQATKHLLEIA
FT                   RYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDRNGNFIWGERGYHAKRFFSN
FT                   YFEIIDPKKGYTQYETRAVPNGSRKLAIGKLIVPTNFEVLREQMKGEPVEPYPVTVECV
FT                   SKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEENKMYIAK
FT                   EGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDV
FT                   ANAELPRMLVDHKTKIIHVVDSYGSLSTGYHVLKTNTVEQLIKFTRCNLESSLKHYRVG
FT                   "
FT   mat_peptide     <1..>1374
FT                   /product="HC protein"
XX
SQ   Sequence 1374 BP; 446 A; 302 C; 326 G; 300 T; 0 other;
     agtgcagcag gagccaactt ctggaaaggc ttcgacagat gctttctcgc ataccgtagt        60
     gacaatcgcg agcatacatg ctattcaggg ctagatgtta ctgagtgcgg cgaggtggca       120
     gcactgatgt gtttagctat gttcccatgc ggaaagataa cctgccctga ctgtgtaaca       180
     gatagtgagc tatcccaagg acaagcaagc ggaccatcta tgcagcacag attgacgcag       240
     ctgcgcgatg tcatcaagtc aagctaccca cgcttcaagc atgcagtgca gatactagat       300
     aggtacgagc aatcactgag cagtgcaaac gaaaactacc aggatttcgc agaaatccag       360
     agtataagcg atggagttga gaaagctgca ttcccacacg tcaacaagct aaacgcaata       420
     ttgatcaaag gggccacagc gacaggggag gaattctcgc aggctacgaa gcatttgctc       480
     gagatagcac gatatctgaa gaacagaact gagaacattg agaagggttc actgaagtcc       540
     tttcgcaaca agatttccca gaaagcgcac atcaacccaa cactaatgtg cgacaaccag       600
     ctcgatagaa atggaaattt catatggggt gagagaggat accatgcaaa acgattcttc       660
     agcaactact ttgagataat cgatccaaag aaaggctaca cccaatatga gacaagagcg       720
     gtaccaaatg ggtcacggaa acttgcaatc ggcaaactaa tagtcccaac gaacttcgaa       780
     gttctaaggg aacagatgaa aggcgaaccg gtagaaccat acccagtaac agtcgagtgt       840
     gtgagcaaat tacagggtga ctttgtccat gcatgttgtt gtgtcacaac agaatcaggc       900
     gacccagtct tgtctgaaat aaaaatgcca accaaacacc acctagtaat tggcaacagc       960
     ggcgatccaa agtacataga tctccctgag atcgaagaga acaaaatgta catagcgaaa      1020
     gaaggttatt gttacatcaa tatcttccta gctatgctag taaatgtcaa ggagtcgcag      1080
     gcaaaggagt tcacgaaagt tgttagggac aaactagttg gcgaacttgg caagtggccc      1140
     actctgttag atgtggcaac cgcttgttat ttcctgaaag tattttaccc agacgttgct      1200
     aacgctgaat tgccacgcat gctagtggac cataagacaa agataattca tgtcgttgat      1260
     tcatatgggt cactgtcaac tggatatcat gtccttaaga caaatactgt ggagcaactc      1320
     attaagttca cgagatgcaa tttggagtca agcttgaaac actaccgcgt cgga            1374
//