ID AJ831578; SV 3; linear; genomic RNA; STD; VRL; 2226 BP. XX AC AJ831578; AJ843168; AJ879489; XX DT 15-SEP-2004 (Rel. 81, Created) DT 22-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Cucumber mosaic virus segment RNA 3 complete sequence XX KW coat protein; cp gene; movement protein; mp gene. XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RC revised by [3] RA Mahinghara B.K.; RT ; RL Submitted (14-SEP-2004) to the INSDC. RL Mahinghara B.K., Plant Virus Lab, Floriculture Division, I.H.B.T. RL (C.S.I.R.), P. O. Box 6, Palampur, Himachal Pradseh, 176 061, INDIA. XX RN [2] RA Mahinghara B.K., Hallan V., Zaidi A.A.; RT "Variability in the genome of Cucumber mosaic virus infecting Lilium RT longiflorum in India"; RL Unpublished. XX RN [3] RC revised by [4] RA Mahinghara B.K.; RT ; RL Submitted (05-OCT-2004) to the INSDC. RL Mahinghara B.K., Plant Virus Lab, Floriculture Division, I.H.B.T. RL (C.S.I.R.), P. O. Box 6, Palampur, Himachal Pradseh, 176 061, INDIA. XX RN [4] RP 1-2226 RA Mahinghara B.K.; RT ; RL Submitted (14-MAR-2005) to the INSDC. RL Mahinghara B.K., Plant Virus Lab, Floriculture Division, I.H.B.T. RL (C.S.I.R.), P. O. Box 6, Palampur, Himachal Pradseh, 176 061, INDIA. XX DR MD5; 900dd23e1b833d69601136ec4de92bd9. DR EuropePMC; PMC3550734; 23637513. DR EuropePMC; PMC3550809; 23730005. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..2226 FT /organism="Cucumber mosaic virus" FT /segment="3" FT /host="Lilium longiflorum" FT /mol_type="genomic RNA" FT /country="India:Himachal Pradesh" FT /clone="1" FT /db_xref="taxon:12305" FT CDS 120..959 FT /gene="mp" FT /product="movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:Q659R1" FT /protein_id="CAH41945.2" FT /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH FT WMRADNAISQQSSAATSDDLQKILFSPEAIKKMATECDLGRHHWMRADNAISVRPLVPE FT VTHGRIASFFKSGYDVGELRSKGYMSVPQVLCAVTRTVSTDAEGSLRIYLADLGDKVKE FT RQGYIWYTGTTACVCGNGQARLSFKNNNYNRIAAGKTLVLPFNRLAEQTKPSAVARLLK FT SQLNNIESSQYVLTNARIDQNARSESEELIVESPPAAIGSSSASRSEAHRPQVVNGL" FT CDS 1259..1915 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:Q53IH4" FT /db_xref="InterPro:IPR000247" FT /db_xref="InterPro:IPR023800" FT /db_xref="InterPro:IPR037137" FT /db_xref="UniProtKB/TrEMBL:Q53IH4" FT /protein_id="CAI84629.1" FT /translation="MDKSGSTSAGRSRRRRPRRGSRSAPSSADANFRVLSQHLSRLNKT FT LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV FT SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN FT NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPT" XX SQ Sequence 2226 BP; 524 A; 527 C; 535 G; 640 T; 0 other; gtaatcttac cactgtgtgt gtgtgtgtgt gtgtgtgtcg cgtcgtgtcg tgttgtccgc 60 acatttgagt cgtgctgtcc gcacatttat ctgtgtcagt gtgttagatt acccgaggca 120 tggctttcca aggtaccagt aggactttaa ctcaacagtc ctcagcggct acgtctgacg 180 atcttcaaaa gatattattt agccctgaag ccattaagaa aatggctact gagtgtgacc 240 taggccggca tcactggatg cgcgctgata acgctatttc tcaacagtcc tcagcggcta 300 cgtctgacga tcttcaaaag atattattta gccctgaagc cattaagaaa atggctactg 360 agtgtgacct aggccggcat cactggatgc gcgctgataa cgctatttca gtccggcccc 420 tcgttcccga agtaacccac ggtcgtattg cttccttctt taagtctgga tatgatgttg 480 gtgaattacg ctctaaaggt tatatgagcg tccctcaagt attgtgtgct gttactcgaa 540 cagtttccac cgatgctgaa ggatctttga gaatttacct ggctgatcta ggcgacaagg 600 ttaaagaaag acaagggtat atttggtata ccggcaccac agcatgcgtg tgtggtaatg 660 ggcaagcacg gttgtctttt aagaacaaca actacaatcg tatcgcagct gggaagactc 720 tagtactgcc tttcaacaga ttagctgagc aaacaaaacc gtcagctgtc gctcgcctgt 780 tgaagtcgca attgaacaat atcgaatctt cgcaatatgt gttgacgaat gcgaggattg 840 atcaaaacgc gcgcagtgag tccgaggaat tgattgttga aagccctccc gccgcaatcg 900 ggagttcttc cgcgtcccgc tccgaagccc atagaccgca ggtggttaac ggtctttagc 960 actttggtgc gtattagtat atatttgtgt atgtgtcttt acgtacctta taatatatct 1020 atagtgtcct gtgtgagttg atacagtaga catctgtgac gcgatgccgt gttgagaagg 1080 gaacacatct ggttttagta agtccacatc atagttttga ggttcaattc ctcttgctcc 1140 ctgttgggat ccttactttc tcatggatgc ttctccgcga gattgcgtta ttgtctactg 1200 actatataga gagtttgtgc tgtgttttct cttttgtgtc gtagaattga gtcgagtcat 1260 ggacaaatct ggatcaacca gtgccggtcg tagccgtcga cgtcgtccgc gtcgtggttc 1320 ccgctccgcc ccctcctccg cggatgctaa ctttagagtc ttgtcgcagc atctttcgcg 1380 acttaataag acgttagcag ctggtcgtcc aactattaac cacccaacct ttgtagggag 1440 tgaacgctgt aaacctgggt acacgttcac atctatcacc ctaaagccac caaaaataga 1500 ccgagggtct tattatggta aaaggttgtt attacctgat tcagtcacgg aatatgataa 1560 gaaacttgtt tcgcgcattc aaattcgagt taatcctttg ccgaaatttg attcaaccgt 1620 gtgggtgaca gtccgtaaag ttcctgcctc ctcggactta tccgttgccg ccatctctgc 1680 tatgtttgcg gacggagcct caccggtact ggtttatcag tacgctgcat ctggagtcca 1740 agctaacaac aaactgttgt atgatctttc ggcgatgcgc gctgatatag gcgacatgag 1800 aaagtacgcc gtcctcgtgt attcaaaaga cgatgcactc gagacagacg agttagtact 1860 tcatgttgac gtcgagcacc aacgtattcc cacatccgga gtgctcccga cttagttccg 1920 tgttcccagg accctccctc catttttggt gggagctgag ttggcagtat tgctacaaac 1980 tgtctgaagt cgttaaatca gtgtgtcatt gtacacatta tggcgaacgg gttgtccatc 2040 cagcttacgg ctaaaatggt cagtcgtgga gaaatccacg ccagtagact tacaagtctc 2100 tgaggcaccc ttgaaaccat ctcctaggtt tcttcggaag gacttcggtc cgtgtacttc 2160 tagcacaatg tgctagttta gagtacgggt gtcccccact ttcgtggggc ctccataagg 2220 agacca 2226 //