ID   AJ829779; SV 1; linear; genomic RNA; STD; VRL; 1835 BP.
XX
AC   AJ829779;
XX
DT   03-FEB-2005 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Cucumber mosaic virus partial MP gene for 3a protein and CP gene for coat
DE   protein, genomic RNA, isolate VAL90/1
XX
KW   3a protein; coat protein; CP gene; MP gene.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-1835
RA   Fraile A.;
RT   ;
RL   Submitted (07-SEP-2004) to the INSDC.
RL   Fraile A., Biotecnologia, Universidad Politecnica de Madrid,
RL   E.T.S.Ingenieros Agronomos, Ciudad Universitaria, 28040-Madrid, SPAIN.
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.11.017.
RX   PUBMED; 15661167.
RA   Bonnet J., Fraile A., Sacristan S., Malpica J.M., Garcia-Arenal F.;
RT   "Role of recombination in the evolution of natural populations of Cucumber
RT   mosaic virus, a tripartite RNA plant virus";
RL   Virology 332(1):359-368(2005).
XX
DR   MD5; 4ab42877003a10e9f646e6a348973408.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1835
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="3"
FT                   /host="Lycopersicon esculentum (tomato)"
FT                   /isolate="VAL90/1"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain:Valencia"
FT                   /db_xref="taxon:12305"
FT   CDS             <1..798
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q5GPI2"
FT                   /protein_id="CAH25540.1"
FT                   /translation="SDELQKILFSPEAIKKMATECDLGRHHWMRADNAISVRPLVPEVT
FT                   HGRIASFFKSGYDAGELSSKGYMSVPQVLCAVTRTVSTDAEGSLRIYLADLGDKELSPI
FT                   DGQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIERHGYIGYTGTTASVCSNW
FT                   QARFSSKNNNYTHIAAGKTLVLPFNRLAEQSKPSAVARLLKSQLNNIESSQYVLTNAKI
FT                   NQNARSESEELNVESPPIAIGSSSASRSETFRPQVVNGTLVFS"
FT   CDS             1086..1742
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q5GPI1"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q5GPI1"
FT                   /protein_id="CAH25541.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDPVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 1835 BP; 435 A; 429 C; 431 G; 540 T; 0 other;
     tctgacgaac ttcaaaagat attatttagc cctgaagcca ttaagaagat ggctactgag        60
     tgtgacctag gccggcatca ttggatgcgt gctgataatg ctatttcagt ccggcccctc       120
     gttcccgaag taacccacgg tcgtattgct tctttcttta agtctggata tgatgctggt       180
     gaattaagct ctaaaggata tatgagcgtt cctcaagtgt tgtgtgctgt tactcgaaca       240
     gtttccaccg acgctgaggg atctttgaga atttacctag ctgatttagg cgacaaggag       300
     ttatctccta tagatggaca gtgcgtcaca ttacataacc atgatctacc cgctttagtg       360
     tctttccaac cgacgtatga ttgtcctatg gaaactgttg ggaatcgtaa gcggtgtttt       420
     gctgttgtta tcgaaagaca tggttatatt gggtataccg gcaccacagc tagcgtgtgt       480
     agtaattggc aagcacggtt ttcttctaag aataacaact acactcacat cgcagctggg       540
     aagactctag tactgccatt caacagatta gctgagcaat cgaaaccgtc agccgtcgct       600
     cgcctgttga agtcgcaatt gaacaacata gaatcttcgc aatacgtttt aacgaatgcg       660
     aagatcaatc agaatgcgcg cagtgagtcc gaggaattaa atgttgagag ccctcccatc       720
     gcaatcggga gttcttccgc gtcccgctcc gaaaccttca gaccgcaggt ggttaacggt       780
     actttagtgt tttcgtagcg ttttagtata taagtatatg tgagtctgta cataatacta       840
     tatctatagt gtcctgtgtg agttgataca gtagacatct gtgacgcgat gttgtgttga       900
     gaagagagca catctggttt tagtaaaccc acaacatatc tttgaggttc aattcctctc       960
     gttccctgtt gggccccttt actttttcat ggatgcttct ccacgagatt gcgtttcgtc      1020
     tacttatcct aagagtattg tgctgtgttt tctctttgtg tagtagaatc aagtcgagtc      1080
     gagtcatgga caaatctgaa tcaaccagtg ctggtcgtaa tcgtcgacgt cgtccgcgtc      1140
     gtggttcccg ctccgctccc tcctccgcgg atgctaactt tagagtcttg tcgcagcagc      1200
     tttcgcgact taataagacg ttagcagctg gtcgtccaac tattaaccac ccaacctttg      1260
     tgggtagtga acgctgtaaa cctgggtaca cgttcacatc tattaccctg aagccgccaa      1320
     aaatagaccg cgggtcttat tatggtaaaa ggttgttgct acctgatcca gtcacggagt      1380
     tcgataagaa gcttgtttcg cgcattcaaa ttcgagttaa tcctttgccg aaatttgatt      1440
     ctaccgtgtg ggtgacagtc cgtaaagttc ctgcctcctc ggacttatcc gttgccgcta      1500
     tctctgctat gtttgcggac ggagcctcac cggtactggt ttatcagtat gctgcatccg      1560
     gcgttcaagc caacaacaaa ttgttgtacg atctttcggc gatgcgcgct gatattggcg      1620
     acatgagaaa gtacgccgtc ctcgtgtatt caaaagacga tgcgctcgag acggacgagt      1680
     tggtacttca tgttgacatc gagcaccaac gcattcccac atctggggtg ctcccagttt      1740
     gaatccgtgg ttttcccaga atcctccctc cggtcctgtg gcgggagctg agttggtagt      1800
     gttgctataa actgcctgaa gtcactaaac gcttt                                 1835
//