ID   AJ829777; SV 1; linear; genomic RNA; STD; VRL; 1833 BP.
XX
AC   AJ829777;
XX
DT   03-FEB-2005 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Cucumber mosaic virus partial MP gene for 3a protein and CP gene for coat
DE   protein, genomic RNA, isolate BAR96/1
XX
KW   3a protein; coat protein; CP gene; MP gene.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-1833
RA   Fraile A.;
RT   ;
RL   Submitted (07-SEP-2004) to the INSDC.
RL   Fraile A., Biotecnologia, Universidad Politecnica de Madrid,
RL   E.T.S.Ingenieros Agronomos, Ciudad Universitaria, 28040-Madrid, SPAIN.
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.11.017.
RX   PUBMED; 15661167.
RA   Bonnet J., Fraile A., Sacristan S., Malpica J.M., Garcia-Arenal F.;
RT   "Role of recombination in the evolution of natural populations of Cucumber
RT   mosaic virus, a tripartite RNA plant virus";
RL   Virology 332(1):359-368(2005).
XX
DR   MD5; 6adbc2e44e4be36545dbb2b61924d86d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1833
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="3"
FT                   /host="melon"
FT                   /isolate="BAR96/1"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain:Barcelona"
FT                   /db_xref="taxon:12305"
FT   CDS             <1..786
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q5GPI6"
FT                   /protein_id="CAH25536.1"
FT                   /translation="SDDLQKILFSPEAIKKMATECDLGRHHWMRADNAISVRPLVPEVT
FT                   HGRIASFFKSGYEVGELCSKGYMSVPQVLCAVTRTVSTDAEGSLRIYLADLGDKELSPI
FT                   DGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIERHGYIGYTGTTASVCSNW
FT                   QARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLKSQLNNIESSQYLLTNAKI
FT                   NQNARSESEDLNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1086..1742
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q76U37"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q76U37"
FT                   /protein_id="CAH25537.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 1833 BP; 438 A; 424 C; 428 G; 543 T; 0 other;
     tctgacgatc ttcaaaagat attatttagc cctgaagcca ttaagaaaat ggctactgag        60
     tgtgacctag gccggcatca ttggatgcgc gctgataatg ctatttcagt ccggcccctc       120
     gttcccgaag taacccacgg tcgtattgct tccttcttta agtctggata tgaagttggt       180
     gaattatgct caaaaggata catgagtgtc cctcaagtgt tatgtgctgt tactcgaaca       240
     gtttccactg atgctgaagg gtctttgaga atttacttag ctgatctagg cgacaaggag       300
     ttatctccca tagatgggca atgcgtttcg ttacataacc atgatcttcc cgctttggtg       360
     tctttccaac cgacgtatga ttgtcctatg gaaacagttg ggaatcgtaa gcggtgtttt       420
     gctgtcgtta tcgaaagaca tggttacatt gggtataccg gtaccacagc tagcgtgtgt       480
     agtaattggc aagcaaggtt ttcatctaag aataacaact acactcatat cgcagctggg       540
     aagactctag tactgccttt caacagatta gctgagcaaa caaaaccgtc agctgttgct       600
     cgcctgttga agtcgcaatt gaacaacatt gaatcttcgc aatatttgtt aacgaatgcg       660
     aagattaatc aaaatgcgcg cagtgagtcc gaggatttaa atgttgagag ccctcccgcc       720
     gcaatcggga gttcttccgc gtcccgctcc gaagccttca gaccgcaggt ggttaacggt       780
     ctttagcact ttggtgcgta ttagtatata agtatttgtg agtctgtaca taatactata       840
     tctatagtgt cctgtgtgag ttgatacagt agacatctgt gacgcgatgc cgtgttgaga       900
     agggaacaca tctggtttta gtaagcctac atcatagttt tgaggttcaa ttcctcttac       960
     tccctgttga gccccttact ttctcatgga tgcttctccg cgagattgcg ttattgtcta      1020
     ctgtctatat agagagtgtg tgtgctgtgt tttctctctt ttgtgtcgta gaattgagtc      1080
     gagtcatgga caaatctgaa tcaaccagtg ctggtcgtaa ccgtcgacgt cgtccgcgtc      1140
     gtggttcccg ctccgccccc tcctccgcgg atgctaactt tagagtcttg tcgcagcagc      1200
     tttcgcgact taataagacg ttagcagctg gtcgtccaac tattaaccac ccaacctttg      1260
     tagggagtga acgctgtaga cctgggtaca cgttcacatc tattacccta aagccaccaa      1320
     aaatagaccg tgggtcttat tacggtaaaa ggttgttatt acctgattca gtcacggaat      1380
     atgataagaa gcttgtttcg cgcattcaaa ttcgagttaa tcctttgccg aaatttgatt      1440
     ctaccgtgtg ggtgacagtc cgtaaagttc ctgcctcctc ggacttatcc gttgccgcca      1500
     tctctgctat gttcgcggac ggagcctcac cggtactggt ttatcagtat gccgcatctg      1560
     gagtccaagc caacaacaaa ttgttgtatg atctttcggc gatgcgcgct gatataggtg      1620
     acatgagaaa gtacgccgtc ctcgtgtatt caaaagacga tgcgctcgag acggacgagc      1680
     tagtacttca tgttgacatc gagcaccaac gcattcccac gtctggagtg ctcccagtct      1740
     gatttcgtgt tcccagaatc ctccctccga tttctgtggc gggagctgag ttggcagttc      1800
     tgctataaac tgtctgaagt cactaaacgt ttt                                   1833
//