ID   AJ829771; SV 1; linear; genomic RNA; STD; VRL; 1832 BP.
XX
AC   AJ829771;
XX
DT   03-FEB-2005 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Cucumber mosaic virus partial MP gene for 3a protein and CP gene for coat
DE   protein, genomic RNA, isolate MAD96/3
XX
KW   3a protein; coat protein; CP gene; MP gene.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-1832
RA   Fraile A.;
RT   ;
RL   Submitted (07-SEP-2004) to the INSDC.
RL   Fraile A., Biotecnologia, Universidad Politecnica de Madrid,
RL   E.T.S.Ingenieros Agronomos, Ciudad Universitaria, 28040-Madrid, SPAIN.
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.11.017.
RX   PUBMED; 15661167.
RA   Bonnet J., Fraile A., Sacristan S., Malpica J.M., Garcia-Arenal F.;
RT   "Role of recombination in the evolution of natural populations of Cucumber
RT   mosaic virus, a tripartite RNA plant virus";
RL   Virology 332(1):359-368(2005).
XX
DR   MD5; ab21cfd3804101f5f9f68786f9ee460e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1832
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="3"
FT                   /host="melon"
FT                   /isolate="MAD96/3"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain:Madrid"
FT                   /db_xref="taxon:12305"
FT   CDS             <1..786
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q5GPJ8"
FT                   /protein_id="CAH25524.1"
FT                   /translation="SDDLQKILFSPEAIKKMATECDLGRHHWMRADNAISVRPLVPEVT
FT                   HGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTEAEGSLRIYLADLGDKELSPI
FT                   DGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIERHGYIGYTGTTASVCSNW
FT                   QARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLKSQLNNIESSQYVLTDSKI
FT                   NQNARSESEDLNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1085..1741
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q76U37"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q76U37"
FT                   /protein_id="CAH25525.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 1832 BP; 436 A; 430 C; 429 G; 537 T; 0 other;
     tctgatgatc ttcaaaagat attatttagc cctgaagcca ttaagaaaat ggctactgag        60
     tgtgacctag gccggcatca ctggatgcgc gctgataatg ctatttcagt ccggcccctc       120
     gttcccgaag taacccatgg tcgtattgct tccttcttta agtctggata tgatgtcggt       180
     gaattgtgct ctaaaggata tatgagcgtc cctcaagtgt tgtgtgctgt tactcgaacg       240
     gtttctaccg aggctgaggg atctttgaga atttacctgg ctgatttagg cgacaaggag       300
     ttatctccta tagatggaca atgcgtatca ttacataacc atgatcttcc cgctttagtg       360
     tctttccaac cgacgtatga ctgtcctatg gaaactgttg ggaatcgtaa gcggtgtttt       420
     gctgtcgtta tcgaaaggca tggttatatt ggttataccg gcaccacagc aagcgtgtgt       480
     agtaattggc aagcacggtt ttcttctaag aataacaact acactcatat cgctgctggg       540
     aagactctag tactgccatt caacagatta gctgagcaaa cgaaaccgtc agccgtagct       600
     cgcctgttga agtcgcaatt gaacaacata gaatcttcgc aatacgtttt aacggattcg       660
     aagattaatc aaaatgcgcg cagtgagtcc gaggatttaa atgttgagag ccctcccgcc       720
     gcaatcggga gttcttccgc gtcccgctcc gaagccttca gaccgcaggt ggttaacggt       780
     ctttagcact ttggtgtgta ttagtatata agtatttgtg agtctgtaca taatactata       840
     tctatagtgt cctgtgtgag ttgatacagt agacatctgt gacgcgatgc cgtgttgaga       900
     agggaacaca tctggtttta gtaagcctac atcatagttt tgaggttcaa ttcctcttac       960
     tccctgttga gccccttact ttctcatgga tgcttctccg cgagattgcg ttattgtcta      1020
     ctgactatat agagagtgtg tgtgctgtat ttttctcttt tgtgtcgtag aattgagtcg      1080
     agtcatggac aaatctgaat caaccagtgc tggtcgtaac cgtcgacgtc gtccgcgtcg      1140
     tggttcccgc tccgccccct cctccgcgga tgctaacttt agagtcctgt cgcagcagct      1200
     ttcgcgactt aataagacgt tagcagctgg tcgtccaact attaaccacc caacctttgt      1260
     agggagtgaa cgctgtagac ctgggtacac gttcacatct attaccctaa agccaccaaa      1320
     aatagaccgt gggtcttatt acggtaaaag gttgttacta cctgattcag tcacagaata      1380
     tgataagaag cttgtttcgc gcattcaaat tcgagttaat cctttgccga aatttgattc      1440
     taccgtgtgg gtgacagtcc gtaaagttcc tgcctcctcg gacttatccg ttgccgccat      1500
     ctctgctatg ttcgcggacg gagcctcacc ggtactggtt tatcagtatg ccgcatctgg      1560
     agtccaagcc aacaacaaac tgttgtatga tctttcggcg atgcgcgctg atataggtga      1620
     catgagaaag tacgccgtcc tcgtgtattc aaaagacgat gcgctcgaga cggacgagct      1680
     agtacttcat gttgacatcg agcaccaacg cattcccacg tctggagtgc tcccagtctg      1740
     attctgtgtt cccagaaccc tccctccgat ctctgtggcg ggagctgagt tggcagttct      1800
     gctataaact gtctgaagtc actaaacgtt tt                                    1832
//