ID   AJ810258; SV 1; linear; genomic RNA; STD; VRL; 773 BP.
XX
AC   AJ810258;
XX
DT   27-JUN-2005 (Rel. 84, Created)
DT   28-JUN-2005 (Rel. 84, Last updated, Version 2)
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DE   Cucumber mosaic Virus cp gene for coat protein, genomic RNA, isolate RT52
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KW   coat protein; cp gene.
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OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
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RN   [1]
RP   1-773
RA   Willingmann P.;
RT   ;
RL   Submitted (09-AUG-2004) to the INSDC.
RL   Willingmann P., Phytomedizin, Biozentrum Klein Flottbeck und Botanisch,
RL   Ohnhorststr. 18, 22609 Hamburg, GERMANY.
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RN   [2]
RX   DOI; 10.1016/j.jviromet.2004.09.021.
RX   PUBMED; 15582705.
RA   Deyong Z., Willingmann P., Heinze C., Adam G., Pfunder M., Frey B.,
RA   Frey J.;
RT   "Differentiation of Cucumber mosaic virus isolates by hybridization to
RT   oligonucleotides in a microarray format";
RL   J. Virol. Methods 123(1):101-108(2005).
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DR   MD5; f6db99f9cbe76daab185c65adb1db176.
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FH   Key             Location/Qualifiers
FH
FT   source          1..773
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /isolate="RT52"
FT                   /serotype="Ia"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /isolation_source="squash"
FT                   /db_xref="taxon:12305"
FT   mat_peptide     1..657
FT                   /gene="cp"
FT                   /product="coat protein"
FT   CDS             1..657
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /function="structural protein"
FT                   /db_xref="GOA:Q4LCI9"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q4LCI9"
FT                   /protein_id="CAH17693.1"
FT                   /translation="MDKSGSTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTLVGSERCRPGYAFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDTLETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 773 BP; 177 A; 207 C; 182 G; 207 T; 0 other;
     atggacaaat ctggatctac cagtgctggt cgtaaccgtc gacgtcgtcc gcgtcgtggt        60
     tcccgctccg ccccctcctc cgcggatgct aactttagag tcttgtcgca gcagctttcg       120
     cgacttaata agacgttagc agctggtcgt ccaactatta accacccaac ccttgtaggg       180
     agtgaacgct gtagacctgg gtacgcgttc acatctatta ccctaaagcc accaaaaata       240
     gaccgtgggt cttattacgg taaaaggttg ttactacctg attcagtcac ggaatatgat       300
     aagaagcttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt tgattctacc       360
     gtgtgggtga cagtccgtaa agttcctgcc tcctcggact tatccgttgc cgccatctct       420
     gctatgttcg cggacggagc ctcaccggta ctggtttatc agtatgccgc atctggagtc       480
     caagccaaca acaaactgtt gtatgatctt tcggcgatgc gcgctgatat aggtgacatg       540
     agaaagtacg ccgtcctcgt gtattcaaaa gacgatacgc tcgagacgga cgagctagta       600
     cttcatgttg acatcgagca ccaacgcatt cccacatctg gagtgctccc agtctgattc       660
     cgtattccca gaatcctccc tccgatctct gtggcgggag ctgagttggc agttctgcta       720
     taaactgtct gaagtcacta aacgttttta cggtgaacgg gttgtccatc cag              773
//