ID   AJ810255; SV 1; linear; genomic RNA; STD; VRL; 788 BP.
XX
AC   AJ810255;
XX
DT   27-JUN-2005 (Rel. 84, Created)
DT   27-JUN-2005 (Rel. 84, Last updated, Version 1)
XX
DE   Cucumber mosaic Virus cp gene for coat protein, genomic RNA, isolate PV0420
XX
KW   coat protein; cp gene.
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OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-788
RA   Willingmann P.;
RT   ;
RL   Submitted (09-AUG-2004) to the INSDC.
RL   Willingmann P., Phytomedizin, Biozentrum Klein Flottbeck und Botanisch,
RL   Ohnhorststr. 18, 22609 Hamburg, GERMANY.
XX
RN   [2]
RX   DOI; 10.1016/j.jviromet.2004.09.021.
RX   PUBMED; 15582705.
RA   Deyong Z., Willingmann P., Heinze C., Adam G., Pfunder M., Frey B.,
RA   Frey J.;
RT   "Differentiation of Cucumber mosaic virus isolates by hybridization to
RT   oligonucleotides in a microarray format";
RL   J. Virol. Methods 123(1):101-108(2005).
XX
DR   MD5; d145a38ae2f13e888280d41f9fa3aacf.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..788
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /isolate="PV0420"
FT                   /serotype="II"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /isolation_source="unknown"
FT                   /db_xref="taxon:12305"
FT   mat_peptide     1..657
FT                   /gene="cp"
FT                   /product="coat protein"
FT   CDS             1..657
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /function="structural protein"
FT                   /db_xref="GOA:Q4LCJ2"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q4LCJ2"
FT                   /protein_id="CAH17690.1"
FT                   /translation="MDKSGSTDASRASRRRRPRRGSRSASGADAGLRALTQQMLKLNKT
FT                   LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLV
FT                   SRIQIRIKPLPKFDSTVWVTVRKVPSSSDLSVAAISAMFGDGNSPVLVYQYAASGVQAN
FT                   NKLLYDLSEMRADIGDMRKYAVLVYSKDDKLEKDEIVLHVDVEHQRIPISRMLPT"
XX
SQ   Sequence 788 BP; 179 A; 196 C; 195 G; 218 T; 0 other;
     atggacaaat ctggatctac cgatgctagt agagcctccc ggcgtcgtcg cccgcgtaga        60
     ggttctcggt ccgcttctgg tgcggatgca gggttgcgtg ctttgactca gcagatgctg       120
     aaactcaata aaaccctcgc cattggtcgt cccaccctta accacccaac cttcgtgggt       180
     agtgaaagct gtaaacccgg ttacactttc acatctatta ccctgaaacc gcctgaaatt       240
     gagaaaggtt catattttgg taggaggttg tctttgccag attcagtcac ggactatgat       300
     aagaagcttg tttcgcgcat tcaaatcagg attaagcctt tgccgaaatt tgattctacc       360
     gtgtgggtta cagttcggaa agtaccttca tcatccgatc tttccgtcgc cgccatctct       420
     gctatgtttg gcgatggtaa ttcaccggtt ttggtttatc agtatgctgc gtccggagtt       480
     caggccaaca ataagttact ttatgacctg tccgagatgc gtgctgatat cggcgacatg       540
     cgtaagtacg ccgtcctggt ttactcgaaa gacgataaac tagagaagga cgagattgtg       600
     cttcatgtcg acgtcgagca tcaacgaatt cctatctcac ggatgctccc gacttagtcc       660
     gtgtgtttac cggcgtccga agacgttaaa ctacgctctc aatcgcgagt gctgagttgg       720
     tagtattgct ccaaactgcc tgaagtccct aaacgtgttg ttgcgcgggg aacgggttgt       780
     ccatccag                                                                788
//