ID AJ810156; SV 1; circular; genomic DNA; STD; VRL; 2748 BP. XX AC AJ810156; XX DT 11-AUG-2004 (Rel. 80, Created) DT 20-OCT-2005 (Rel. 85, Last updated, Version 2) XX DE Stachytarpheta leaf curl virus - [Hn30] complete genome, isolate Hn30 XX KW ac1 gene; ac2 gene; AC2 protein; ac3 gene; AC3 protein; ac4 gene; KW AC4 protein; av1 gene; av2 gene; AV2 protein; coat protein; KW complete genome; Rep protein. XX OS Stachytarpheta leaf curl virus - [Hn30] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2748 RA Zhou X.; RT ; RL Submitted (09-AUG-2004) to the INSDC. RL Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268, RL Hangzhou, Zhejiang, 310029, CHINA. XX RN [3] RX DOI; 10.1007/s00705-005-0568-z. RX PUBMED; 15986176. RA Xiong Q., Fan S., Guo X., Zhou X.; RT "Stachytarpheta leaf curl virus is a novel monopartite begomovirus RT species"; RL Arch. Virol. 150(11):2257-2270(2005). XX DR MD5; c705f5b6d8eb336b068a6199010d2a25. XX FH Key Location/Qualifiers FH FT source 1..2748 FT /organism="Stachytarpheta leaf curl virus - [Hn30]" FT /host="Stachytarpheta" FT /isolate="Hn30" FT /mol_type="genomic DNA" FT /db_xref="taxon:289998" FT CDS 130..480 FT /gene="av2" FT /product="AV2 protein" FT /db_xref="GOA:Q6A0I2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q6A0I2" FT /protein_id="CAH17658.1" FT /translation="MWDPLLNEFPETVHGLRCMLAVKYCQLIEQTYSPDTVGYDLIRDL FT ISVIRARNYVEATRRYSHFHSRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESAHV FT PQAQDVQNVQEP" FT CDS 290..1063 FT /gene="av1" FT /product="coat protein" FT /db_xref="GOA:Q6A0I1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q6A0I1" FT /protein_id="CAH17659.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSW FT VNRPMYRKPKTYRMYKSPDVPRGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGSGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDNE FT PSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQAIVRKFMKVNNHVVYNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT CDS complement(1060..1464) FT /gene="ac3" FT /product="AC3 protein" FT /db_xref="GOA:Q6A0I0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q6A0I0" FT /protein_id="CAH17660.1" FT /translation="MDFRTGEPITAAQAENGVYIWTVRNPLYFKITQHDQRPFSTNHDI FT ITLQVQFNYNLRKALGIHQCFLICRIWTRLRPQTWRFLRVFKYQCIKYLDNLGVISINN FT VIRAFSHVLYNVLEGTIDDELSSIIKFSLY" FT CDS complement(1205..1609) FT /gene="ac2" FT /product="AC2 protein" FT /db_xref="GOA:Q6A0H9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q6A0H9" FT /protein_id="CAH17661.1" FT /translation="MRSSSPSNGHSTQVPIKVQHKIAKRTTRRRRVDLPCGCSYFIAIG FT CHNHGFSHRGTHHCSSSREWRVYLDGQKSPIFQNHPARPEAVLDEPRHNNTPSPIQLQP FT EESVGDTPMFSNLQNLDSFTSSDLAFLKSI" FT CDS complement(1512..2597) FT /gene="ac1" FT /product="Rep protein" FT /db_xref="GOA:Q6A0H8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q6A0H8" FT /protein_id="CAH17662.1" FT /translation="MPPPRRFKIQAKNYFLTYPQCSLTKEEALSQLQKLETPTNKKYIK FT ICRELHEDGSPHLHVLIQFEGKYVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNTGSKSEALNVIKELAPKDYVLQFH FT NLNANLDRIFAPPLEVFVCPFSSSSFNQVPEELHEWSANNVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKNWAIHNAIFVTIQRPL FT YSGSNQGATQNSQANNEETTS" FT CDS complement(2150..2440) FT /gene="ac4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q6A0H7" FT /protein_id="CAH17663.1" FT /translation="MGALISTCLSSSRENTSARITDSSTWSPQPGQHISIRTFRELNPA FT PTSSPISIRTETPSSGESFRSTDDLQEGDNNQPMTLTPQHLTQAVSQRLLM" XX SQ Sequence 2748 BP; 748 A; 554 C; 619 G; 825 T; 2 other; accggatggc cgcgattttt ttaaagtggt cccaccacgt gcatttgttg gccactcaaa 60 acgctccctc aaagcctatt tatttcaaat gcattataaa tactyggtcc ccaagtacta 120 aagctaaaca tgtgggatcc tcttttgaac gagttycccg aaaccgtaca cggtcttagg 180 tgtatgctag ccgtaaaata ttgtcagtta atcgaacaga catactctcc agatacggtc 240 ggttacgatc ttatacgaga tttaatttca gtaattcgtg ctcgcaatta tgtcgaagcg 300 acccgccgat atagtcattt ccactcccgc atccaaggtg cgtcgccggc tgaatttcga 360 cagcccgtat gtcagccgtg ctgctgcccc cactgtcctc gtcacaaaca aaaggaggtc 420 atgggtgaat cggcccatgt accgcaagcc caagacgtac agaatgtaca agagccctga 480 tgttccacga ggatgtgaag gcccatgtaa ggtccaatcg tatgaacaga ggcacgacat 540 atcccatgta ggcaaggtcc tctgtgtgtc tgatgttacg cgtggtagtg ggcttaccca 600 tcgtgttggt aagagattct gtgtgaagtc cgtttatgta ttgggtaaaa tatggatgga 660 tgaaaatatc aagacgaaga atcatacgaa cactgtgatg ttttatcttg ttcgtgatag 720 aaggcccttt ggtactgcta tggattttgg tcaggtgttt aacatgtatg ataatgagcc 780 cagtactgct actatcaaga atgatcttcg agatcgttat caagttttaa ggaaattcac 840 ttcaacagtc acaggtggtc aatatgcaag caaggagcaa gcaatagtta ggaagtttat 900 gaaggtcaac aatcatgtag tgtataatca tcaagaggct gcgaaatatg agaatcacac 960 agagaatgct ctgttattgt atatggcatg tactcatgcc agtaatccag tgtatgctac 1020 tttgaagatt agaatctatt tctatgattc tgttcagaat taataaagac tgaattttat 1080 tatacttgat aattcgtcgt caattgtccc ctctaataca ttgtataaga catgagaaaa 1140 cgccctaatt acattgttta tactaatcac tcccaaattg tctaaatatt taatacattg 1200 atacttaaat actcttaaga aacgccaggt ctgaggacgt aaacgagtcc agattctgca 1260 gattagaaaa cattggtgta tccccaacgc tttcctcagg ttgtagttga attggacttg 1320 gagtgttatt atgtcgtggt tcgtcgagaa cggcctctgg tcgtgctggg tgattttgaa 1380 atatagggga tttctgaccg tccagatata cacgccattc tctgcttgag ctgcagtgat 1440 gggttccccg gtgcgaaaat ccatgattgt ggcagcctat agctatgaaa taagagcatc 1500 cacaagggag gtcaactcgt cgtctcctcg ttgttcgctt ggctattttg tgttgcacct 1560 tgattggaac ctgagtagag tggccgttgg atggtgacga agatcgcatt atgtatagcc 1620 caatttttta atgcggaatt cttttcttcg tctaagaact ctttatagct ggaattgggt 1680 cctggattgc ataggaagat tgttgggata ccacctttaa tttgaactgg cttcccatac 1740 tttgtattgg actgccagtc cctttgggcc cccatgaatt ccttaaagtg ctttagatag 1800 tggggatcga cgtcatcaat gacgttatac caagcatcat tgctgtatac ctttgggctg 1860 agatcaagat gtccacacag ataattgtgt ggtcctaacg acctagccca cattgtttta 1920 cccgtacgac tatcaccttc tatcacaata ctaatcggtc tcaaaggccg cgcagcggca 1980 ctgacaacat tatttgcaga ccactcatga agttcttctg gaacttgatt gaaagaagaa 2040 gaagaaaaag gacaaacaaa tacctctaaa ggaggtgcaa aaatcctatc taaattagca 2100 tttaaattat gaaattgtaa aacataatct tttggagcta actccttaat tacattaaga 2160 gcctctgact tactgcctgt gttaagtgct gcggcgtaag cgtcattggc tgattgttgt 2220 ccccctcttg cagatcgtcc gtcgatctga aactctcccc actcgagggt gtctccgtcc 2280 ttatcgatat aggacttgac gtcggagctg gatttagctc cctgaatgtt cggatggaaa 2340 tgtgctgacc tggttgggga gaccaagtcg aagaatctgt tattcgtgca gacgtatttt 2400 ccctcgaact ggataagcac gtggagatga gggctcccat cttcgtgaag ctctctgcag 2460 attttgatgt atttcttgtt ggttggggtt tctagttttt gaagttggga gagtgcttcc 2520 tctttagtta gagagcactg tggataagtg aggaaataat ttttagcttg tattttaaaa 2580 cgacgcgggg gaggcatttt gagcgtcgtt ttgtattgga gacaatcaac tctatgaaat 2640 gaattggaga ctggagtaca atatatagtg tgtctccaaa tggcattctc gtaattcctc 2700 atagaaattc aaaatttgaa ttggtaaagc ggccatccgt ataatatt 2748 //