ID   AJ781786; SV 1; linear; genomic RNA; STD; VRL; 1814 BP.
XX
AC   AJ781786;
XX
DT   29-MAR-2005 (Rel. 83, Created)
DT   29-MAR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Sweet potato feathery mottle virus partial mRNA for polyprotein, isolate
DE   Unj1
XX
KW   coat protein; CP; NIb protein; nuclear inclusion body protein; polyprotein.
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1814
RA   Tairo F.;
RT   ;
RL   Submitted (07-JUL-2004) to the INSDC.
RL   Tairo F., Plant Biology and Forest Genetics,, Swedish Univ of Agric
RL   Sciences (SLU), Genetic Centre, Box 7080, SE 750 07, Uppsala, SWEDEN.
XX
RN   [4]
RX   DOI; 10.1111/j.1364-3703.2005.00267.x.
RX   PUBMED; 20565651.
RA   Tairo F., Mukasa S.B., Jones R.A.C., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Unravelling the genetic diversity of the three main viruses involved in
RT   Sweet Potato Virus Disease (SPVD), and its practical implications";
RL   Mol. Plant Pathol. 6(2):199-211(2005).
XX
DR   MD5; f49f0308a8f816410f2367cbc7850406.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1814
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /isolate="Unj1"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania:Unguja1"
FT                   /isolation_source="Ipomea batatas"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q599Z2"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q599Z2"
FT                   /protein_id="CAH03752.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANG
FT                   DDLLLAMRPDTAHLLDKFGECFSELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELAR
FT                   NGKAPYIAETALKALYTGVQPNASELSVYTRVLKEMYDDSVLQENDLEVYHQSNENTEF
FT                   KDAGANPPASKPKNVPPPPTITEITDPEDPKQEALKAARAKQPAVIPESYGRDTSKEKE
FT                   SIVGTSSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQF
FT                   EVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDG
FT                   DEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLA
FT                   RYAFDFYELHSATPARAKEAHLQMKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVT
FT                   RNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     646..1590
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1494..1814
XX
SQ   Sequence 1814 BP; 568 A; 336 C; 431 G; 479 T; 0 other;
     ggtaacaata gtggtcagcc atccactgtg gttgacaata cacttatggt tgtattagca        60
     gttcactaca cactgctgaa actaggaatc caagaaagcg agtttgataa atgctgtgtc       120
     tttttcgcaa atggtgatga tttattgttg gcaatgaggc cagatacagc ccatttattg       180
     gataagtttg gtgaatgttt ttctgaatta ggactcaact atgacttttc atcacgaaca       240
     aataagaaag aagatctatg gtttatgtca cactgtggcg taaaacgtga tggaatattt       300
     attccgaagt tggagcctga aaggatcgtt tcaattcttg agtgggaccg ttcacacgag       360
     ccaattcatc gactggaagc aatatgtgct gcgatggtgg aatcatgggg ttatgatgaa       420
     cttcttcatc atattaggaa attctatgca tgggttttgg accaagcccc atacaacgaa       480
     ctagcaagaa atgggaaagc accatatata gctgaaactg cacttaaagc actctatact       540
     ggtgttcaac ctaatgcttc tgaattgagt gtgtatacga gagtgctcaa agaaatgtat       600
     gatgacagtg tgctccaaga gaatgatttg gaagtatatc atcaatccaa tgagaacact       660
     gaatttaaag atgcaggagc gaacccccca gcctctaagc ccaagaacgt acctccacca       720
     cccacaataa ctgaaatcac tgatccagag gacccgaagc aggaagcttt gaaagctgca       780
     cgagcaaagc aacccgcagt cattccagag tcatatggac gagacacgag caaagaaaag       840
     gagtcaatag tggggacatc atcaaagggt gtgagggata aagatgtgaa tgttggcact       900
     gttggtacat ttgttgtgcc acgtgtcaag atgaatgcaa acaagaaaag gcaaccaatg       960
     gtcaatggaa gggccattat aaatttccag cacttgtcaa catatgaacc ggagcagttt      1020
     gaggttgcaa acacccggtc aactcaagaa cagttccaag catggtatga aggagtcaaa      1080
     ggggattatg gtgttgacga cacaggaatg gggatcttat tgaatggact aatggtttgg      1140
     tgcattgaaa atggcacatc cccaaatatc aatggtgtgt ggacaatgat ggatggtgat      1200
     gagcaagtga catacccaat taaaccatta ttagatcatg cagtgcctac ttttaggcag      1260
     attatgacgc acttcagtga cgttgctgaa gcttatatag agatgcgaaa ccgtacaaag      1320
     gcatacatgc caaggtatgg tctacaacgt aatttgactg atatgagtct tgcgcgatat      1380
     gcatttgatt tttacgagct gcattcagct acacctgcac gtgctaagga agcacattta      1440
     cagatgaagg cagccgcact taagaatgcg cgaaatcggt tgtttggttt ggacggaaac      1500
     gtctccacgc aagaagaaga tacggagagg cacacgacaa ctgatgttac tagaaatata      1560
     cataacctct taggaatgag gggtgtgcaa taggacatcc tctgcactgt agcttatact      1620
     tatgttatct ttagtatgcc tttaatttaa attcgtgtct ttcagtcccg aaggagatgg      1680
     ttgaatgcat aacatggtgg gattatatct cggttattgc atttgagaag tcacctttct      1740
     attacgtatc ataagggact cttaaaagtg aggagtacct cgtaagaaaa gcctttttgg      1800
     ttcgtgatcg agcc                                                        1814
//