ID   AJ781785; SV 1; linear; genomic RNA; STD; VRL; 1814 BP.
XX
AC   AJ781785;
XX
DT   29-MAR-2005 (Rel. 83, Created)
DT   29-MAR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Sweet potato feathery mottle virus partial mRNA for polyprotein, isolate
DE   Tar2
XX
KW   coat protein; CP; NIb protein; nuclear inclusion body protein; polyprotein.
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1814
RA   Tairo F.;
RT   ;
RL   Submitted (07-JUL-2004) to the INSDC.
RL   Tairo F., Plant Biology and Forest Genetics,, Swedish Univ of Agric
RL   Sciences (SLU), Genetic Centre, Box 7080, SE 750 07, Uppsala, SWEDEN.
XX
RN   [4]
RX   DOI; 10.1111/j.1364-3703.2005.00267.x.
RX   PUBMED; 20565651.
RA   Tairo F., Mukasa S.B., Jones R.A.C., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Unravelling the genetic diversity of the three main viruses involved in
RT   Sweet Potato Virus Disease (SPVD), and its practical implications";
RL   Mol. Plant Pathol. 6(2):199-211(2005).
XX
DR   MD5; b840be9dbc8f6f7bddbda18329dc46b5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1814
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /isolate="Tar2"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania:Tarime2"
FT                   /isolation_source="Ipomea batatas"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q599Z3"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q599Z3"
FT                   /protein_id="CAH03751.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVHYTLLKLGIQESEFNKCCVFFANG
FT                   DDLLLAMRPDTAHLLDKFGECFSELGLNYNFSSRTNKKEDLWFMSHCGVKRDGIFIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVESWGYDELLRHIRKFYAWVLDQAPYNELAR
FT                   NGKAPYIAETALKALYTGVQPNASELSAYTRVLKEMYDDSMLQENDLEVYHQSNERTEF
FT                   KDAGADPPAPKPKNNPPPPTITEITDPEDPKQAALKAARAKQPAVIPESYGRDTSKESE
FT                   SIVGTSSKGVRDKDVNVGTVGTFAVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQF
FT                   EVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDG
FT                   DEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLA
FT                   RYAFDFYELHSTTPARAKEAHLQMKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVT
FT                   RNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     646..1590
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1594..1814
XX
SQ   Sequence 1814 BP; 567 A; 343 C; 431 G; 473 T; 0 other;
     ggtaataaca gcggtcagcc atctactgtg gttgataata cacttatggt tgtgttagca        60
     gttcactaca cattgctgaa actaggaatc caagaaagcg agtttaataa atgctgtgtc       120
     tttttcgcaa atggtgatga tttattgttg gcaatgaggc cagatacagc ccatttactg       180
     gataagtttg gtgaatgttt ttctgaattg ggactcaatt ataacttttc atcacgaaca       240
     aataagaagg aagatctatg gtttatgtca cactgtggcg tgaaacgtga tggaatattt       300
     attccgaagt tggagcctga aaggattgtt tcaattcttg aatgggatcg ttcacacgag       360
     ccaattcatc gactggaagc aatatgtgcc gcgatggtgg aatcatgggg ttatgatgaa       420
     cttcttcgtc atattaggaa attctatgca tgggttttgg accaagcccc atacaacgaa       480
     ctagcacgaa atgggaaagc accatacata gctgaaactg cactcaaagc actctatact       540
     ggtgttcaac ctaatgcctc tgaattgagt gcgtacacga gagtgctcaa agaaatgtat       600
     gatgacagta tgctccaaga gaatgatttg gaagtatatc atcaatccaa tgagagaact       660
     gaatttaaag atgcaggagc ggaccctcca gcccctaagc ctaagaacaa tcctccacca       720
     cccacaataa ccgaaatcac tgatccagag gatccgaagc aggcagcttt gaaagctgca       780
     cgagcaaagc aacccgcggt cattccagag tcatatggac gagacacgag caaagagagc       840
     gagtcaatag tggggacatc atcaaagggt gtgagggata aagatgtgaa tgttggcacc       900
     gttggcacat tcgctgtacc acgtgtcaag atgaatgcaa acaagaaaag gcaaccaatg       960
     gtcaatggaa gggccattat aaatttccag cacttgtcaa catatgaacc agagcagttt      1020
     gaggttgcaa acacccggtc gactcaagaa cagttccaag catggtatga aggagttaaa      1080
     ggggattatg gtgttgacga cacagggatg gggatcttat tgaatggact aatggtttgg      1140
     tgcattgaaa atggcacatc cccaaatata aatggtgtgt ggacaatgat ggatggtgat      1200
     gagcaagtaa catatccaat taaaccatta ctggaccatg cagtgcctac ttttaggcag      1260
     attatgacgc acttcagtga cgttgctgaa gcttacatag agatgcgaaa ccgtacaaag      1320
     gcatacatgc caaggtatgg tctacaacgt aatttgactg atatgagtct tgcgcgatat      1380
     gcatttgatt tttacgagct gcattcaact acacctgcac gtgctaaaga agcacattta      1440
     cagatgaagg cagccgcact taagaatgcg cgaaatcggt tgtttggttt ggacggaaac      1500
     gtctccacgc aagaagaaga tacggagagg cacacgacaa ctgatgttac tagaaatata      1560
     cataacctct taggaatgag gggtgtgcaa taggacatcc tctgcactgt agcttatact      1620
     tatgttatct ttagtatgcc tttaatttaa attcgtgtct ttcagtcccg aaggagatgg      1680
     ttgaatgcat aacatagtga gattatatct cggttattgc atttgagaag tcacctttct      1740
     attacgtatc ataagggact cttaaaagtg aggagtacct cgtaagaaaa gcctttttgg      1800
     ttcgtgatcg agcc                                                        1814
//